RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 RASGRF1Q13972 1273 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 CAVIN4Q5BKX8 364 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 APOBEC3HQ6NTF7 200 aaKnown RBP5.65□□□□□ -1.51
CUL3-216ENST00000617432 APOBEC3FQ8IUX4 373 aaKnown RBP5.65□□□□□ -1.51
CUL3-216ENST00000617432 AMER2Q8N7J2 671 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 IGDCC4Q8TDY8 1250 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 WWC2-AS2Q96NR7 200 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 R3HDMLQ9H3Y0 253 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 BRMS1Q9HCU9 246 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 PATE3B3GLJ2 98 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 DDX3XO00571 662 aaKnown RBP eCLIP5.64□□□□□ -1.51
CUL3-216ENST00000617432 IPO8O15397 1037 aaKnown RBP5.64□□□□□ -1.51
CUL3-216ENST00000617432 ATE1O95260 518 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 C8BP07358 591 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 GNAI3P08754 354 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 MAP2K2P36507 400 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 IL15P40933 162 aaPredicted RBP5.64□□□□□ -1.51
CUL3-216ENST00000617432 EPHB4P54760 987 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 MAP2K1Q02750 393 aaPredicted RBP5.64□□□□□ -1.51
CUL3-216ENST00000617432 NOGQ13253 232 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 FOXE3Q13461 319 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 OVOS1Q6IE37 1185 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 CEP85Q6P2H3 762 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 FTSJ3Q8IY81 847 aaKnown RBP5.64□□□□□ -1.51
CUL3-216ENST00000617432 NAF1Q96HR8 494 aaKnown RBP5.64□□□□□ -1.51
CUL3-216ENST00000617432 PTCHD1Q96NR3 888 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 RNF186Q9NXI6 227 aa5.64□□□□□ -1.51
CUL3-216ENST00000617432 SORBS3O60504 671 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 ZNF623O75123 536 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 MCAMP43121 646 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 PPP2CBP62714 309 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 PPP2CAP67775 309 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 TCP10Q12799 353 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 PRR31Q5SQ13 230 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 LDLRAD1Q5T700 205 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 TMEM192Q8IY95 271 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 ATG4CQ96DT6 458 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 ZDHHC15Q96MV8 337 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 NEUROD6Q96NK8 337 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 BCL11AQ9H165 835 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 IKZF4Q9H2S9 585 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 DDX4Q9NQI0 724 aaKnown RBP5.63□□□□□ -1.51
CUL3-216ENST00000617432 HMG20BQ9P0W2 317 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.63□□□□□ -1.51
CUL3-216ENST00000617432 VTI1BQ9UEU0 232 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 EXOC6BQ9Y2D4 811 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 CASP8AP2Q9UKL3 1982 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 ZSWIM8A7E2V4 1837 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 RFX7Q2KHR2 1363 aa5.63□□□□□ -1.51
CUL3-216ENST00000617432 MYO5AQ9Y4I1 1855 aaKnown RBP5.62□□□□□ -1.51
CUL3-216ENST00000617432 PATL2C9JE40 543 aaKnown RBP5.62□□□□□ -1.51
CUL3-216ENST00000617432 ATP8B2P98198 1209 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 VGLL4Q14135 290 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 TNNI3KQ59H18 835 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 MIIPQ5JXC2 388 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 CDC42EP5Q6NZY7 148 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 MIGA2Q7L4E1 593 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 NLRC3Q7RTR2 1065 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 ARMC9Q7Z3E5 817 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 ADGRA1Q86SQ6 560 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 SSH3Q8TE77 659 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 TBC1D22AQ8WUA7 517 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 TEKT1Q969V4 418 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 WNK4Q96J92 1243 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 YTHDC1Q96MU7 727 aaKnown RBP5.62□□□□□ -1.51
CUL3-216ENST00000617432 CCDC8Q9H0W5 538 aaPredicted RBP5.62□□□□□ -1.51
CUL3-216ENST00000617432 ABCF2Q9UG63 623 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 FPGT-TNNI3KV9GXZ4 949 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 LAMB1P07942 1786 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 MAST2Q6P0Q8 1798 aa5.62□□□□□ -1.51
CUL3-216ENST00000617432 SIPA1L1O43166 1804 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 MYH2Q9UKX2 1941 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 MYO1BO43795 1136 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 PPFIA2O75334 1257 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 SURF6O75683 361 aaKnown RBP5.61□□□□□ -1.51
CUL3-216ENST00000617432 CHGBP05060 677 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 GARTP22102 1010 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 NF2P35240 595 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 FKBP1BP68106 108 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 MECOMQ03112 1051 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 MVPQ14764 893 aaKnown RBP5.61□□□□□ -1.51
CUL3-216ENST00000617432 FBXL19Q6PCT2 694 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 C7orf61Q8IZ16 206 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 LZTR1Q8N653 840 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.61□□□□□ -1.51
CUL3-216ENST00000617432 WDR66Q8TBY9 1149 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 ZKSCAN4Q969J2 545 aaPredicted RBP5.61□□□□□ -1.51
CUL3-216ENST00000617432 EAF2Q96CJ1 260 aaPredicted RBP5.61□□□□□ -1.51
CUL3-216ENST00000617432 OPTNQ96CV9 577 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 ABHD8Q96I13 439 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 PTPN18Q99952 460 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 IL1RAPL2Q9NP60 686 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 PIH1D3Q9NQM4 214 aaKnown RBP5.61□□□□□ -1.51
CUL3-216ENST00000617432 KBTBD4Q9NVX7 518 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 DBNLQ9UJU6 430 aaKnown RBP5.61□□□□□ -1.51
CUL3-216ENST00000617432 RCAN3Q9UKA8 241 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 DENND2AQ9ULE3 1009 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 ATRNL1Q5VV63 1379 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 DOCK2Q92608 1830 aa5.61□□□□□ -1.51
CUL3-216ENST00000617432 AKAP11Q9UKA4 1901 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms