RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 EYA3Q99504 573 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 MOV10L1Q9BXT6 1211 aaKnown RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 SMYD3Q9H7B4 428 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 CCDC87Q9NVE4 849 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 CSF1RP07333 972 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 PAEPP09466 180 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 PRDX5P30044 214 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 FUT2Q10981 343 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 KCNK18Q7Z418 384 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 TLCD1Q96CP7 247 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 MTA3Q9BTC8 594 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 SYNCQ9H7C4 482 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 POTEFA5A3E0 1075 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 POTEIP0CG38 1075 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 POTEGQ6S5H5 508 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 SYN2Q92777 582 aaPredicted RBP16.73■□□□□ 0.27
SYNRG-223ENST00000616179 SPZ1Q9BXG8 430 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 DCLRE1BQ9H816 532 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 SPOCK2Q92563 424 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 TMEM47Q9BQJ4 181 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 ZNF148Q9UQR1 794 aa16.73■□□□□ 0.27
SYNRG-223ENST00000616179 CACNA1FO60840 1977 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 TRPA1O75762 1119 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 KRT36O76013 467 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 BCRP11274 1271 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 SLC16A2P36021 539 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 MECOMQ03112 1051 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 NPY5RQ15761 445 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 SH2D4BQ5SQS7 431 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 SH3RF3Q8TEJ3 882 aaPredicted RBP16.72■□□□□ 0.27
SYNRG-223ENST00000616179 CNKSR1Q969H4 720 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 CARD9Q9H257 536 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 PCIF1Q9H4Z3 704 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 RARGP13631 454 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 ATF7P17544 494 aaPredicted RBP16.72■□□□□ 0.27
SYNRG-223ENST00000616179 PGM1P36871 562 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 TUBP50607 506 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 KDSRQ06136 332 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 TTC17Q96AE7 1141 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 MYH13Q9UKX3 1938 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 FAM47DPA6NHR8 397 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 GRAMD1BQ3KR37 738 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 LRRC55Q6ZSA7 311 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 ECHDC2Q86YB7 292 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 OPTNQ96CV9 577 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 METTL14Q9HCE5 456 aaKnown RBP16.72■□□□□ 0.27
SYNRG-223ENST00000616179 TYW1Q9NV66 732 aaKnown RBP16.72■□□□□ 0.27
SYNRG-223ENST00000616179 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
SYNRG-223ENST00000616179 O00370 1275 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 SLC37A4O43826 429 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 NOL4O94818 638 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 NR3C1P04150 777 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 KITP10721 976 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 COMTP21964 271 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 PON1P27169 355 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 PIK3CAP42336 1068 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 CLUL1Q15846 466 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 C1orf146Q5VVC0 180 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 C4orf32Q8N8J7 132 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 KRT35Q92764 455 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 TRABDQ9H4I3 376 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 NMRK1Q9NWW6 199 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 PKD2L1Q9P0L9 805 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 SH3BP1Q9Y3L3 701 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 PCDH11YQ9BZA8 1340 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 MAGEA13PA6NCF6 341 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 DDX3XO00571 662 aaKnown RBP eCLIP16.71■□□□□ 0.27
SYNRG-223ENST00000616179 KIAA0391O15091 583 aaKnown RBP16.71■□□□□ 0.27
SYNRG-223ENST00000616179 LCA5LO95447 670 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 CASP4P49662 377 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 BTKQ06187 659 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 CCDC125Q86Z20 511 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 TPH2Q8IWU9 490 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 GSDMBQ8TAX9 411 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 GRAMD1AQ96CP6 724 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 CCDC124Q96CT7 223 aaKnown RBP16.71■□□□□ 0.27
SYNRG-223ENST00000616179 ECHS1P30084 290 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 HIBADHP31937 336 aaKnown RBP16.71■□□□□ 0.27
SYNRG-223ENST00000616179 KPNB1Q14974 876 aaKnown RBP16.71■□□□□ 0.27
SYNRG-223ENST00000616179 ACBD5Q5T8D3 534 aaPredicted RBP16.71■□□□□ 0.27
SYNRG-223ENST00000616179 SH3GLB2Q9NR46 395 aa16.71■□□□□ 0.27
SYNRG-223ENST00000616179 PPARGC1AQ9UBK2 798 aaKnown RBP16.71■□□□□ 0.27
SYNRG-223ENST00000616179 G3V3G9 751 aa16.7■□□□□ 0.26
SYNRG-223ENST00000616179 HSPA6P17066 643 aa16.7■□□□□ 0.26
SYNRG-223ENST00000616179 MARCKSL1P49006 195 aa16.7■□□□□ 0.26
SYNRG-223ENST00000616179 ITGA8P53708 1063 aa16.7■□□□□ 0.26
SYNRG-223ENST00000616179 POLGP54098 1239 aaPredicted RBP16.7■□□□□ 0.26
SYNRG-223ENST00000616179 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
SYNRG-223ENST00000616179 UBAP2Q5T6F2 1119 aaKnown RBP16.7■□□□□ 0.26
SYNRG-223ENST00000616179 DCAF8Q5TAQ9 597 aa16.7■□□□□ 0.26
SYNRG-223ENST00000616179 NLRP9Q7RTR0 991 aa16.7■□□□□ 0.26
SYNRG-223ENST00000616179 GALNT15Q8N3T1 639 aa16.7■□□□□ 0.26
SYNRG-223ENST00000616179 BLOC1S4Q9NUP1 217 aa16.7■□□□□ 0.26
SYNRG-223ENST00000616179 ANGPTL2Q9UKU9 493 aa16.7■□□□□ 0.26
SYNRG-223ENST00000616179 FAF1Q9UNN5 650 aaPredicted RBP16.7■□□□□ 0.26
SYNRG-223ENST00000616179 LRCH1Q9Y2L9 728 aa16.7■□□□□ 0.26
SYNRG-223ENST00000616179 WTIPA6NIX2 430 aaPredicted RBP16.7■□□□□ 0.26
SYNRG-223ENST00000616179 LDHBP07195 334 aaKnown RBP16.7■□□□□ 0.26
SYNRG-223ENST00000616179 EPHB1P54762 984 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms