RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 TWF2Q6IBS0 349 aaKnown RBP15.72■□□□□ 0.11
SNPH-203ENST00000614659 ERICH1Q86X53 443 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 TMEM35BQ8NCS4 154 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 PIGOQ8TEQ8 1089 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 RNF139Q8WU17 664 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 CPSF3Q9UKF6 684 aaKnown RBP15.72■□□□□ 0.11
SNPH-203ENST00000614659 MAD1L1Q9Y6D9 718 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 PITPNM2Q9BZ72 1349 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 DRAP1Q14919 205 aaPredicted RBP15.72■□□□□ 0.11
SNPH-203ENST00000614659 SLC18A3Q16572 532 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 DARS2Q6PI48 645 aaKnown RBP15.72■□□□□ 0.11
SNPH-203ENST00000614659 VCPKMTQ9H867 229 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 PMS2P54278 862 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 PDIK1LQ8N165 341 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 SAMD3Q8N6K7 520 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 ATP6V1G3Q96LB4 118 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 HINFPQ9BQA5 517 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 POTEFA5A3E0 1075 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 DCTN3O75935 186 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 POTEIP0CG38 1075 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 AKR1B1P15121 316 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 RGS2P41220 211 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 BSPRYQ5W0U4 402 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 POTEGQ6S5H5 508 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 POTEEQ6S8J3 1075 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 KAZALD1Q96I82 304 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 FRMD3A2A2Y4 597 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 SMIM24O75264 130 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 RARBP10826 455 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 PPP2R2AP63151 447 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 NME8Q8N427 588 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 SPATA4Q8NEY3 305 aa15.72■□□□□ 0.11
SNPH-203ENST00000614659 DDX56Q9NY93 547 aaKnown RBP15.72■□□□□ 0.11
SNPH-203ENST00000614659 ANKRD26Q9UPS8 1709 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 BAG2O95816 211 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 NBPF9Q3BBW0 867 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 RASIP1Q5U651 963 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 ATG16L1Q676U5 607 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 ZNF564Q8TBZ8 553 aaPredicted RBP15.71■□□□□ 0.11
SNPH-203ENST00000614659 KLHL29Q96CT2 875 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 PGBD4Q96DM1 585 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 ADAM22Q9P0K1 906 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.71■□□□□ 0.11
SNPH-203ENST00000614659 EIF3DO15371 548 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNPH-203ENST00000614659 ARL4CP56559 192 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 FAM96AQ9H5X1 160 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 ACTN1P12814 892 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 SLC1A1P43005 524 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 EFNA5P52803 228 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 SESN3P58005 492 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 PPP4CP60510 307 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 CAPN12Q6ZSI9 719 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 HNRNPLLQ8WVV9 542 aaKnown RBP15.71■□□□□ 0.11
SNPH-203ENST00000614659 ANAPC7Q9UJX3 599 aa15.71■□□□□ 0.11
SNPH-203ENST00000614659 MAPK13O15264 365 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 TTI1O43156 1089 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 SCP2P22307 547 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 TFDP2Q14188 446 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 PLCB4Q15147 1175 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 KLHL38Q2WGJ6 581 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 C1orf228Q6PIY5 440 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 ZBTB33Q86T24 672 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 ERO1BQ86YB8 467 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 ERGIC2Q96RQ1 377 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 GBA2Q9HCG7 927 aaPredicted RBP15.71■□□□□ 0.1
SNPH-203ENST00000614659 PSD3Q9NYI0 1048 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 MAP3K20Q9NYL2 800 aaKnown RBP15.71■□□□□ 0.1
SNPH-203ENST00000614659 SLC9A2Q9UBY0 812 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 IP6K2Q9UHH9 426 aa15.71■□□□□ 0.1
SNPH-203ENST00000614659 CYP4F22Q6NT55 531 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 FGFR1OP2Q9NVK5 253 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 PPP1R3GB7ZBB8 358 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 MAFGO15525 162 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 ZRANB2O95218 330 aaKnown RBP eCLIP15.7■□□□□ 0.1
SNPH-203ENST00000614659 LMNAP02545 664 aaKnown RBP15.7■□□□□ 0.1
SNPH-203ENST00000614659 TXNP10599 105 aaKnown RBP15.7■□□□□ 0.1
SNPH-203ENST00000614659 COG7P83436 770 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 PDE1BQ01064 536 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 DRP2Q13474 957 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 SPARCL1Q14515 664 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 PPP2R5DQ14738 602 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 TADA2BQ86TJ2 420 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 NDUFAF2Q8N183 169 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 CFAP61Q8NHU2 1237 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 STK33Q9BYT3 514 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 L2HGDHQ9H9P8 463 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 SEPT10Q9P0V9 454 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 COL5A2P05997 1499 aaPredicted RBP15.7■□□□□ 0.1
SNPH-203ENST00000614659 GOLGA8SH3BPF8 625 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 DPYSL4O14531 572 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 ARPP19P56211 112 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 ARL13BQ3SXY8 428 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 HSP90AA5PQ58FG0 334 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 LXNQ9BS40 222 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 TRIM62Q9BVG3 475 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 SLC38A10Q9HBR0 1119 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 TAF6LQ9Y6J9 622 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 GPR75-ASB3A0A0A6YYF3 556 aa15.7■□□□□ 0.1
SNPH-203ENST00000614659 MAGEB2O15479 319 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms