RNA–Protein interactions for RNA: ENST00000613560.1

AC008567.3-201, humanhuman

TSL 1 (best)

Gene AC008567.3, Length 595 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008567.3-201ENST00000613560 SSBP05455 408 aaKnown RBP eCLIP20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 P4HBP07237 508 aaKnown RBP20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 HOXA11P31270 313 aaPredicted RBP20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 UBXN11Q5T124 520 aa20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 MRPL10Q7Z7H8 261 aaKnown RBP20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 NEK8Q86SG6 692 aa20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 CABP7Q86V35 215 aa20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 URGCPQ8TCY9 931 aa20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 OXER1Q8TDS5 423 aa20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 PSPC1Q8WXF1 523 aaKnown RBP20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 HAS1Q92839 578 aa20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 TM6SF1Q9BZW5 370 aa20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 RSAD1Q9HA92 442 aa20.71■□□□□ 0.91
AC008567.3-201ENST00000613560 H0Y858 1186 aa20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 LAMTOR4Q0VGL1 99 aa20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 SCRN1Q12765 414 aa20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 PPP4R3AQ6IN85 833 aa20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 SRGAP1Q7Z6B7 1085 aa20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 ZDHHC14Q8IZN3 488 aa20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 ATOH1Q92858 354 aaPredicted RBP20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 KLHL5Q96PQ7 755 aa20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 LXNQ9BS40 222 aa20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 PDRG1Q9NUG6 133 aa20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 RGL1Q9NZL6 768 aa20.7■□□□□ 0.9
AC008567.3-201ENST00000613560 ZBTB39O15060 712 aa20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 EPB41L2O43491 1005 aaKnown RBP20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 CCNT1O60563 726 aaKnown RBP20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 DKC1O60832 514 aaKnown RBP eCLIP20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 POMCP01189 267 aa20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 CNPP09543 421 aaKnown RBP20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 PIK3AP1Q6ZUJ8 805 aa20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 PPFIBP1Q86W92 1011 aa20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 TMEM105Q8N8V8 129 aa20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 USTQ9Y2C2 406 aa20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 FAN1Q9Y2M0 1017 aa20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 CACNA1HO95180 2353 aa20.69■□□□□ 0.9
AC008567.3-201ENST00000613560 NRP1O14786 923 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 LILRB3O75022 631 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 ALDH2P05091 517 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 GCFC2P16383 781 aaKnown RBP20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 KLRC2P26717 231 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 YWHABP31946 246 aaKnown RBP20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 RFC5P40937 340 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 EMC2Q15006 297 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 EPHA7Q15375 998 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 EARS2Q5JPH6 523 aaKnown RBP20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 NCAPH2Q6IBW4 605 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 GPR149Q86SP6 731 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 POTEDQ86YR6 584 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 C4orf19Q8IY42 314 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 EXOC8Q8IYI6 725 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 RNF149Q8NC42 400 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 DYDC2Q96IM9 177 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 FAM193BQ96PV7 902 aaPredicted RBP20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 EMILIN2Q9BXX0 1053 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 SFXN1Q9H9B4 322 aa20.68■□□□□ 0.9
AC008567.3-201ENST00000613560 FAM205CA6NFA0 338 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 SPDYE4A6NLX3 237 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 GALR2O43603 387 aaPredicted RBP20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 GFRA3O60609 400 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 CLCN4P51793 760 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 CYP4A11Q02928 519 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 CTTNQ14247 550 aaKnown RBP20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 XKR9Q5GH70 373 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 FERMT3Q86UX7 667 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 PLCD3Q8N3E9 789 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 SMG8Q8ND04 991 aaKnown RBP20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 TMEM175Q9BSA9 504 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 KANSL3Q9P2N6 904 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 PPME1Q9Y570 386 aa20.67■□□□□ 0.9
AC008567.3-201ENST00000613560 C2CD2LO14523 706 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 TBX3O15119 743 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 ST18O60284 1047 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 MARCH6O60337 910 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 CDKL5O76039 1030 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 NCLP19338 710 aaKnown RBP20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 SPIRE1Q08AE8 756 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 OTUD6AQ7L8S5 288 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 TAS1R1Q7RTX1 841 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 TCP11Q8WWU5 503 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 EIF2AQ9BY44 585 aaKnown RBP20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 IRF2BPLQ9H1B7 796 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 RNF39Q9H2S5 420 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 MRPL17Q9NRX2 175 aaKnown RBP20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 MARCH5Q9NX47 278 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 PRG3Q9Y2Y8 225 aaPredicted RBP20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 CNTNAP2Q9UHC6 1331 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 USP34Q70CQ2 3546 aa20.66■□□□□ 0.9
AC008567.3-201ENST00000613560 STK36Q9NRP7 1315 aa20.65■□□□□ 0.9
AC008567.3-201ENST00000613560 ITGA4P13612 1032 aa20.65■□□□□ 0.9
AC008567.3-201ENST00000613560 NUBP1P53384 320 aa20.65■□□□□ 0.9
AC008567.3-201ENST00000613560 CCDC149Q6ZUS6 474 aa20.65■□□□□ 0.9
AC008567.3-201ENST00000613560 CPB2Q96IY4 423 aa20.65■□□□□ 0.9
AC008567.3-201ENST00000613560 ZSWIM4Q9H7M6 989 aa20.65■□□□□ 0.9
AC008567.3-201ENST00000613560 XPNPEP1Q9NQW7 623 aa20.65■□□□□ 0.9
AC008567.3-201ENST00000613560 TPCN1Q9ULQ1 816 aa20.65■□□□□ 0.9
AC008567.3-201ENST00000613560 HES2Q9Y543 173 aa20.65■□□□□ 0.9
AC008567.3-201ENST00000613560 IPPQ9Y573 584 aa20.65■□□□□ 0.9
AC008567.3-201ENST00000613560 DENND4AQ7Z401 1863 aa20.64■□□□□ 0.9
AC008567.3-201ENST00000613560 ASAP2O43150 1006 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms