RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 SWSAP1Q6NVH7 229 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 MFN1Q8IWA4 741 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 ANKRD13AQ8IZ07 590 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 RSAD2Q8WXG1 361 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 PRMT6Q96LA8 375 aaPredicted RBP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 RPS6KC1Q96S38 1066 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 DEFB129Q9H1M3 183 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 DBR1Q9UK59 544 aaKnown RBP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 PLIN4Q96Q06 1357 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 CASZ1Q86V15 1759 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 DENND3A2RUS2 1198 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 MOCS3O95396 460 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 TROVE2P10155 538 aaKnown RBP eCLIP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 ATF2P15336 505 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 ZNF131P52739 623 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 CCZ1BP86790 482 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 CCZ1P86791 482 aaPredicted RBP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 REEP2Q9BRK0 252 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 SYNGAP1Q96PV0 1343 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 PAX7P23759 505 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 RHBDL3P58872 404 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 EHHADHQ08426 723 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 GRAMD4Q6IC98 578 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 FOXR2Q6PJQ5 311 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 HAUS6Q7Z4H7 955 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 ARHGAP22Q7Z5H3 698 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 NSMCE1Q8WV22 266 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 DHX38Q92620 1227 aaKnown RBP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 OSBPL1AQ9BXW6 950 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 SNX25Q9H3E2 840 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 G3BP2Q9UN86 482 aaKnown RBP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 NUP188Q5SRE5 1749 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 MAGEB2O15479 319 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 CLDN3O15551 220 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 NR3C2P08235 984 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 SARSP49591 514 aaKnown RBP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 GPC5P78333 572 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 CCDC25Q86WR0 208 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 RAB3IL1Q8TBN0 382 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 RNF34Q969K3 372 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 MMS19Q96T76 1030 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 MED10Q9BTT4 135 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 STK33Q9BYT3 514 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 TMEM39BQ9GZU3 492 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 INTUQ9ULD6 942 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 GTF2H1P32780 548 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 RFC1P35251 1148 aaPredicted RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 BACE1P56817 501 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 GOLGA8FQ08AF8 430 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 GOLGA8DPQ0D2H9 430 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 TAF12Q16514 161 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 TMEM119Q4V9L6 283 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 MYLK4Q86YV6 388 aaPredicted RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 NME8Q8N427 588 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 SMARCAD1Q9H4L7 1026 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 TOPORSQ9NS56 1045 aaPredicted RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 TARSL2A2RTX5 802 aaKnown RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 PABPN1LA6NDY0 278 aaKnown RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 FOXP2O15409 715 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 MSH4O15457 936 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 MEFVO15553 781 aaPredicted RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 IGBP1P78318 339 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 NAA30Q147X3 362 aaPredicted RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 DNAJC24Q6P3W2 148 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 CCDC80Q76M96 950 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 VSIG1Q86XK7 387 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 DNERQ8NFT8 737 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 AKT1S1Q96B36 256 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 GGA3Q9NZ52 723 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 PPP1R9AQ9ULJ8 1098 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 TTC26A0AVF1 554 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 SLC16A4O15374 487 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 OPHN1O60890 802 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 B4GALNT2Q8NHY0 566 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 ABCB6Q9NP58 842 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 ZCCHC17Q9NP64 241 aaKnown RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 UTP6Q9NYH9 597 aaKnown RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 CASP1P29466 404 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 HIBCHQ6NVY1 386 aaPredicted RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 EMBQ6PCB8 327 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 ILDR1Q86SU0 546 aaPredicted RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 TRIM42Q8IWZ5 723 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 SPATA33Q96N06 139 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 BEGAINQ9BUH8 593 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 RANBP17Q9H2T7 1088 aaKnown RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 SART1O43290 800 aaKnown RBP9.32□□□□□ -0.92
PDE6A-204ENST00000613228 IRX4P78413 519 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 CAV1Q03135 178 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 FYB2Q5VWT5 728 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 SEPT1Q8WYJ6 367 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 KATNAL1Q9BW62 490 aa9.32□□□□□ -0.92
PDE6A-204ENST00000613228 CYP3A7-CYP3A51PA0A087WV96 503 aa9.31□□□□□ -0.92
PDE6A-204ENST00000613228 PIK3CDO00329 1044 aa9.31□□□□□ -0.92
PDE6A-204ENST00000613228 PODXLO00592 558 aa9.31□□□□□ -0.92
PDE6A-204ENST00000613228 IL18RAPO95256 599 aa9.31□□□□□ -0.92
PDE6A-204ENST00000613228 GH1P01241 217 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms