RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 CHCHD3Q9NX63 227 aaKnown RBP16.42■□□□□ 0.22
TNXB-209ENST00000613214 AURKCQ9UQB9 309 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 ASNSP08243 561 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 TBL3Q12788 808 aaKnown RBP16.42■□□□□ 0.22
TNXB-209ENST00000613214 BEND6Q5SZJ8 279 aaPredicted RBP16.42■□□□□ 0.22
TNXB-209ENST00000613214 HEATR6Q6AI08 1181 aaKnown RBP16.42■□□□□ 0.22
TNXB-209ENST00000613214 ACAD11Q709F0 780 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 SIX5Q8N196 739 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 SYT2Q8N9I0 419 aaPredicted RBP16.42■□□□□ 0.22
TNXB-209ENST00000613214 C6orf222P0C671 652 aaPredicted RBP16.42■□□□□ 0.22
TNXB-209ENST00000613214 ATP1A3P13637 1013 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 SLC8A1P32418 973 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 ZBTB17Q13105 803 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 SURF1Q15526 300 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 OXER1Q8TDS5 423 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 CEP95Q96GE4 821 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 PITPNM3Q9BZ71 974 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.42■□□□□ 0.22
TNXB-209ENST00000613214 MCAMP43121 646 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 TMEM179Q6ZVK1 233 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 EPM2AIP1Q7L775 607 aaPredicted RBP16.42■□□□□ 0.22
TNXB-209ENST00000613214 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 NRBF2Q96F24 287 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 TM6SF1Q9BZW5 370 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 KCNH4Q9UQ05 1017 aa16.42■□□□□ 0.22
TNXB-209ENST00000613214 CAPZA2P47755 286 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 MFN1Q8IWA4 741 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 MGAT5BQ3V5L5 792 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 C1orf146Q5VVC0 180 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 PGBD4Q96DM1 585 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 L3MBTL3Q96JM7 780 aaPredicted RBP16.41■□□□□ 0.22
TNXB-209ENST00000613214 PALLDQ8WX93 1383 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 CCDC159P0C7I6 412 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 PRR29P0C7W0 189 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 DMC1Q14565 340 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 ANGPT1Q15389 498 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 APOBEC2Q9Y235 224 aaKnown RBP16.41■□□□□ 0.22
TNXB-209ENST00000613214 GYG2O15488 501 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
TNXB-209ENST00000613214 RPAINQ86UA6 219 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 CLMNQ96JQ2 1002 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 TEX12Q9BXU0 123 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 GCOM2Q9BZD3 368 aaPredicted RBP16.41■□□□□ 0.22
TNXB-209ENST00000613214 MYO1GB0I1T2 1018 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 MAP4P27816 1152 aaKnown RBP16.41■□□□□ 0.22
TNXB-209ENST00000613214 SESN2P58004 480 aaPredicted RBP16.41■□□□□ 0.22
TNXB-209ENST00000613214 MORF4L2Q15014 288 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 CYB5R4Q7L1T6 521 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 TMEM143Q96AN5 459 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 PBKQ96KB5 322 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 ARHGAP26Q9UNA1 814 aa16.41■□□□□ 0.22
TNXB-209ENST00000613214 KBTBD13C9JR72 458 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 NDUFA10O95299 355 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 GCFC2P16383 781 aaKnown RBP16.4■□□□□ 0.22
TNXB-209ENST00000613214 AARSP49588 968 aaKnown RBP eCLIP16.4■□□□□ 0.22
TNXB-209ENST00000613214 COA1Q9GZY4 146 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 BLMP54132 1417 aaPredicted RBP16.4■□□□□ 0.22
TNXB-209ENST00000613214 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
TNXB-209ENST00000613214 TFRCP02786 760 aaKnown RBP16.4■□□□□ 0.22
TNXB-209ENST00000613214 TRIM49P0CI25 452 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 TRIM49CP0CI26 452 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 ZBED8Q8IZ13 594 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 ADGRF4Q8IZF3 695 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 HSPBP1Q9NZL4 362 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 PIK3C2GO75747 1445 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 RNF103-CHMP3A0A140T963 221 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 BRD2P25440 801 aaKnown RBP16.4■□□□□ 0.22
TNXB-209ENST00000613214 TNFAIP2Q03169 654 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 RNF149Q8NC42 400 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 NEK9Q8TD19 979 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 HPS3Q969F9 1004 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 AFF2P51816 1311 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 RNF123Q5XPI4 1314 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 TLR2O60603 784 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 PDCLQ13371 301 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 AMHR2Q16671 573 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 HIBCHQ6NVY1 386 aaPredicted RBP16.4■□□□□ 0.22
TNXB-209ENST00000613214 LVRNQ6Q4G3 990 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 CCDC33Q8N5R6 958 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 ZC4H2Q9NQZ6 224 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 NR3C1P04150 777 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 PBLDP30039 288 aaPredicted RBP16.4■□□□□ 0.22
TNXB-209ENST00000613214 SDC4P31431 198 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 SOAT1P35610 550 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 OR1G1P47890 313 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 ROR1Q01973 937 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 PID1Q7Z2X4 250 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 BTBD6Q96KE9 485 aa16.4■□□□□ 0.22
TNXB-209ENST00000613214 HSPA8P11142 646 aaKnown RBP16.39■□□□□ 0.22
TNXB-209ENST00000613214 VAMP7P51809 220 aa16.39■□□□□ 0.22
TNXB-209ENST00000613214 JAK3P52333 1124 aa16.39■□□□□ 0.22
TNXB-209ENST00000613214 ST8SIA6P61647 398 aa16.39■□□□□ 0.22
TNXB-209ENST00000613214 PDIA2Q13087 525 aaKnown RBP16.39■□□□□ 0.22
TNXB-209ENST00000613214 GTF2H3Q13889 308 aa16.39■□□□□ 0.22
TNXB-209ENST00000613214 CHMP1BQ7LBR1 199 aa16.39■□□□□ 0.22
TNXB-209ENST00000613214 SLC30A5Q8TAD4 765 aa16.39■□□□□ 0.22
TNXB-209ENST00000613214 MED4Q9NPJ6 270 aa16.39■□□□□ 0.22
TNXB-209ENST00000613214 CD2BP2O95400 341 aaKnown RBP16.39■□□□□ 0.21
TNXB-209ENST00000613214 RALAP11233 206 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms