RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 ABCB4P21439 1286 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZNF132P52740 706 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 LLGL1Q15334 1064 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 LRRC23Q53EV4 343 aaPredicted RBP11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 GPATCH4Q5T3I0 446 aaKnown RBP11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZNF571Q7Z3V5 609 aaPredicted RBP11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 C1orf131Q8NDD1 294 aaKnown RBP11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 CLIP3Q96DZ5 547 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 SEPT11Q9NVA2 429 aaKnown RBP11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 KLHL42Q9P2K6 505 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 CHORDC1Q9UHD1 332 aaPredicted RBP11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 GRIN2DO15399 1336 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 FZD9O00144 591 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 HDAC4P56524 1084 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 SLC18A3Q16572 532 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 CEP85LQ5SZL2 805 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 HOOK3Q86VS8 718 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 TRIM59Q8IWR1 403 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 RNPC3Q96LT9 517 aaKnown RBP11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 SPOCK3Q9BQ16 436 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 REEP2Q9BRK0 252 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 DBNDD1Q9H9R9 158 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 CD248Q9HCU0 757 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 FAM169AQ9Y6X4 670 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 SMCHD1A6NHR9 2005 aa11.56□□□□□ -0.56
PCDHGC3-202ENST00000611950 EBAG9O00559 213 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 GCNT3O95395 438 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 ITGA4P13612 1032 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 IBSPP21815 317 aaPredicted RBP11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 PPFIA1Q13136 1202 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 MAEAQ7L5Y9 396 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 CATSPER3Q86XQ3 398 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 GPC2Q8N158 579 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 MAB21L3Q8N8X9 362 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 VPS37AQ8NEZ2 397 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 LMBR1Q8WVP7 490 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 ANO3Q9BYT9 981 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 CELF4Q9BZC1 486 aaKnown RBP11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 BHMT2Q9H2M3 363 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 DPH5Q9H2P9 285 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZNF510Q9Y2H8 683 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 PCDHGC5Q9Y5F6 944 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 SPO11Q9Y5K1 396 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 ABCB11O95342 1321 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 CETN3O15182 167 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 LCA5LO95447 670 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 NAA25Q14CX7 972 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 TLDC1Q6P9B6 456 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 HHIPL2Q6UWX4 724 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 IFT20Q8IY31 132 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 SMYD1Q8NB12 490 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 WDR37Q9Y2I8 494 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 SIPA1L1O43166 1804 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 DDTLA6NHG4 134 aaPredicted RBP11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 EIF3HO15372 352 aaKnown RBP eCLIP11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 AKAP3O75969 853 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 GFPT2O94808 682 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 HLA-DOAP06340 250 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 VIL1P09327 827 aaKnown RBP11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 EEF2P13639 858 aaKnown RBP11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 IL4RP24394 825 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 NAB2Q15742 525 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 CLPPQ16740 277 aaPredicted RBP11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZC2HC1CQ53FD0 456 aaPredicted RBP11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 HYIQ5T013 277 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 VTI1AQ96AJ9 217 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 SLC39A3Q9BRY0 314 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 KCTD10Q9H3F6 313 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 PPANQ9NQ55 473 aaKnown RBP11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 ARMCX3Q9UH62 379 aaPredicted RBP11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 PCDHA2Q9Y5H9 948 aa11.55□□□□□ -0.56
PCDHGC3-202ENST00000611950 SSU72P8A0A1W2PR75 194 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 PJA2O43164 708 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 RNF8O76064 485 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 HSPA8P11142 646 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 UCHL3P15374 230 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 CRKP46108 304 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 INHBCP55103 352 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 COG2Q14746 738 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 SEPT2Q15019 361 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 RPS6KA1Q15418 735 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 EMBQ6PCB8 327 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 C11orf96Q7Z7L8 435 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 SIAH1Q8IUQ4 282 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 LARGE2Q8N3Y3 721 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 ANKK1Q8NFD2 765 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 U2AF1L4Q8WU68 220 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 IQCDQ96DY2 449 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 POM121Q96HA1 1249 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 SH2D3AQ9BRG2 576 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 NEUROG2Q9H2A3 272 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 DHX36Q9H2U1 1008 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 LRRC4CQ9HCJ2 640 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 KCNMB3Q9NPA1 279 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 PKD2L1Q9P0L9 805 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 AMACRQ9UHK6 382 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 PLAAQ9Y263 795 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms