RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 RNPC3Q96LT9 517 aaKnown RBP14.11□□□□□ -0.15
TCF3-220ENST00000611869 ELP3Q9H9T3 547 aa14.11□□□□□ -0.15
TCF3-220ENST00000611869 LRRC10BA6NIK2 292 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 TLR3O15455 904 aaKnown RBP14.1□□□□□ -0.15
TCF3-220ENST00000611869 STAT5BP51692 787 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 CCDC6Q16204 474 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 XKR3Q5GH77 459 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 ZNF667Q5HYK9 610 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 COMMD10Q9Y6G5 202 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 PARP4Q9UKK3 1724 aaKnown RBP14.1□□□□□ -0.15
TCF3-220ENST00000611869 SART1O43290 800 aaKnown RBP14.1□□□□□ -0.15
TCF3-220ENST00000611869 ZRANB2O95218 330 aaKnown RBP eCLIP14.1□□□□□ -0.152e-6■■■■■ 27.5
TCF3-220ENST00000611869 PON1P27169 355 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 MAN1A1P33908 653 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 PRKCEQ02156 737 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 FAM167AQ96KS9 214 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 PACSIN1Q9BY11 444 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 TARSL2A2RTX5 802 aaKnown RBP14.1□□□□□ -0.15
TCF3-220ENST00000611869 GRID2IPA4D2P6 1211 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 ZBTB39O15060 712 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 GGPS1O95749 300 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 RFX1P22670 979 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 Q4G0T1 1027 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 EXOC8Q8IYI6 725 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 BBOF1Q8ND07 529 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 PPM1EQ8WY54 764 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 HAS1Q92839 578 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 RNF25Q96BH1 459 aaPredicted RBP14.1□□□□□ -0.15
TCF3-220ENST00000611869 MED10Q9BTT4 135 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 MKNK1Q9BUB5 465 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 TRIM7Q9C029 511 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 CAPN9O14815 690 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 CA8P35219 290 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 TMEM119Q4V9L6 283 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 OR6B2Q6IFH4 312 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 CCNI2Q6ZMN8 369 aaPredicted RBP14.1□□□□□ -0.15
TCF3-220ENST00000611869 RNF149Q8NC42 400 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 TCP11Q8WWU5 503 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
TCF3-220ENST00000611869 PSMD1Q99460 953 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 CAPN7Q9Y6W3 813 aa14.1□□□□□ -0.15
TCF3-220ENST00000611869 EML1O00423 815 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 GNA15P30679 374 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 IFT88Q13099 833 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 NBPF12Q5TAG4 269 aaPredicted RBP14.09□□□□□ -0.15
TCF3-220ENST00000611869 TRIM59Q8IWR1 403 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 AKT1S1Q96B36 256 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 MOV10L1Q9BXT6 1211 aaKnown RBP14.09□□□□□ -0.15
TCF3-220ENST00000611869 TAF1DQ9H5J8 278 aaPredicted RBP14.09□□□□□ -0.15
TCF3-220ENST00000611869 NAGPAQ9UK23 515 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 STK10O94804 968 aaKnown RBP14.09□□□□□ -0.15
TCF3-220ENST00000611869 H2AFXP16104 143 aaPredicted RBP14.09□□□□□ -0.15
TCF3-220ENST00000611869 ZNF699Q32M78 642 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 TRAPPC11Q7Z392 1133 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 SPATA33Q96N06 139 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 CBWD1Q9BRT8 395 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 MIS12Q9H081 205 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 ZWILCHQ9H900 591 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 C19orf81C9J6K1 198 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 LMNB2Q03252 620 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 SURF1Q15526 300 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 AMIGO3Q86WK7 504 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 TMEM35BQ8NCS4 154 aa14.09□□□□□ -0.15
TCF3-220ENST00000611869 SREK1Q8WXA9 508 aaKnown RBP14.09□□□□□ -0.15
TCF3-220ENST00000611869 WNT10BO00744 389 aa14.08□□□□□ -0.15
TCF3-220ENST00000611869 RASGRF2O14827 1237 aa14.08□□□□□ -0.15
TCF3-220ENST00000611869 PLSCR1O15162 318 aa14.08□□□□□ -0.15
TCF3-220ENST00000611869 ITIH3Q06033 890 aa14.08□□□□□ -0.15
TCF3-220ENST00000611869 IFRD2Q12894 506 aaPredicted RBP14.08□□□□□ -0.15
TCF3-220ENST00000611869 EPC2Q52LR7 807 aa14.08□□□□□ -0.15
TCF3-220ENST00000611869 C4orf32Q8N8J7 132 aa14.08□□□□□ -0.15
TCF3-220ENST00000611869 SPATA20Q8TB22 786 aa14.08□□□□□ -0.15
TCF3-220ENST00000611869 P3H4Q92791 437 aa14.08□□□□□ -0.15
TCF3-220ENST00000611869 PI4K2AQ9BTU6 479 aa14.08□□□□□ -0.15
TCF3-220ENST00000611869 DISP2A7MBM2 1401 aa14.08□□□□□ -0.15
TCF3-220ENST00000611869 ATMINO43313 823 aaPredicted RBP14.08□□□□□ -0.16
TCF3-220ENST00000611869 ZKSCAN8Q15776 578 aaPredicted RBP14.08□□□□□ -0.16
TCF3-220ENST00000611869 CDO1Q16878 200 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 C6orf163Q5TEZ5 329 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 DIS3Q9Y2L1 958 aaKnown RBP14.08□□□□□ -0.16
TCF3-220ENST00000611869 RRP15Q9Y3B9 282 aaKnown RBP14.08□□□□□ -0.16
TCF3-220ENST00000611869 SCINQ9Y6U3 715 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 RGPD5Q99666 1765 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
TCF3-220ENST00000611869 CCDC14Q49A88 953 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 FYB2Q5VWT5 728 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 SYN2Q92777 582 aaPredicted RBP14.08□□□□□ -0.16
TCF3-220ENST00000611869 LRRC37A3O60309 1634 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 PODXLO00592 558 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 VCAM1P19320 739 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 SLMAPQ14BN4 828 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 MAP7D3Q8IWC1 876 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 SLC16A10Q8TF71 515 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 MMTAG2Q9BU76 263 aaKnown RBP14.08□□□□□ -0.16
TCF3-220ENST00000611869 SPC25Q9HBM1 224 aa14.08□□□□□ -0.16
TCF3-220ENST00000611869 TTI1O43156 1089 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 MED7O43513 233 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 PSMA2P25787 234 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms