RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 MINDY3Q9H8M7 445 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 RSAD1Q9HA92 442 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 GJB4Q9NTQ9 266 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 SPDYE4A6NLX3 237 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 B4GALT3O60512 393 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 BRD1O95696 1058 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 SSBP05455 408 aaKnown RBP eCLIP27.25■■□□□ 1.95
CDKN3-211ENST00000611205 RFC5P40937 340 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 LAMTOR4Q0VGL1 99 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 NCAPH2Q6IBW4 605 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 CABP7Q86V35 215 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 SLC22A17Q8WUG5 538 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 VN1R3Q9BXE9 311 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 PPME1Q9Y570 386 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 C2orf16Q68DN1 1984 aa27.25■■□□□ 1.95
CDKN3-211ENST00000611205 TDRD15B5MCY1 1934 aaKnown RBP27.24■■□□□ 1.95
CDKN3-211ENST00000611205 DDHD2O94830 711 aa27.24■■□□□ 1.95
CDKN3-211ENST00000611205 YWHABP31946 246 aaKnown RBP27.24■■□□□ 1.95
CDKN3-211ENST00000611205 EPHA7Q15375 998 aa27.24■■□□□ 1.95
CDKN3-211ENST00000611205 PTPN14Q15678 1187 aa27.24■■□□□ 1.95
CDKN3-211ENST00000611205 TMC5Q6UXY8 1006 aa27.24■■□□□ 1.95
CDKN3-211ENST00000611205 POTEDQ86YR6 584 aa27.24■■□□□ 1.95
CDKN3-211ENST00000611205 UBALD2Q8IYN6 164 aa27.24■■□□□ 1.95
CDKN3-211ENST00000611205 OXER1Q8TDS5 423 aa27.24■■□□□ 1.95
CDKN3-211ENST00000611205 HAS1Q92839 578 aa27.24■■□□□ 1.95
CDKN3-211ENST00000611205 FAM86C1Q9NVL1 165 aa27.24■■□□□ 1.95
CDKN3-211ENST00000611205 RGL1Q9NZL6 768 aa27.24■■□□□ 1.95
CDKN3-211ENST00000611205 STK36Q9NRP7 1315 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 TBX3O15119 743 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 ASGR2P07307 311 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 AFF1P51825 1210 aaKnown RBP27.23■■□□□ 1.95
CDKN3-211ENST00000611205 EMC2Q15006 297 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 XKR9Q5GH70 373 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 OTUD6AQ7L8S5 288 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 MRPL10Q7Z7H8 261 aaKnown RBP27.23■■□□□ 1.95
CDKN3-211ENST00000611205 PPFIBP1Q86W92 1011 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 C4orf19Q8IY42 314 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 TCP11Q8WWU5 503 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 DYDC2Q96IM9 177 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 NAP1L4Q99733 375 aaKnown RBP27.23■■□□□ 1.95
CDKN3-211ENST00000611205 SMOC2Q9H3U7 446 aa27.23■■□□□ 1.95
CDKN3-211ENST00000611205 CNTNAP2Q9UHC6 1331 aa27.22■■□□□ 1.95
CDKN3-211ENST00000611205 POMCP01189 267 aa27.22■■□□□ 1.95
CDKN3-211ENST00000611205 KLRC2P26717 231 aa27.22■■□□□ 1.95
CDKN3-211ENST00000611205 CYP4A11Q02928 519 aa27.22■■□□□ 1.95
CDKN3-211ENST00000611205 CTTNQ14247 550 aaKnown RBP27.22■■□□□ 1.95
CDKN3-211ENST00000611205 UBXN11Q5T124 520 aa27.22■■□□□ 1.95
CDKN3-211ENST00000611205 RNF149Q8NC42 400 aa27.22■■□□□ 1.95
CDKN3-211ENST00000611205 FEZF2Q8TBJ5 459 aa27.22■■□□□ 1.95
CDKN3-211ENST00000611205 EMILIN2Q9BXX0 1053 aa27.22■■□□□ 1.95
CDKN3-211ENST00000611205 LIMD1Q9UGP4 676 aa27.22■■□□□ 1.95
CDKN3-211ENST00000611205 FAN1Q9Y2M0 1017 aa27.22■■□□□ 1.95
CDKN3-211ENST00000611205 ERLIN2O94905 339 aa27.21■■□□□ 1.95
CDKN3-211ENST00000611205 ALDH2P05091 517 aa27.21■■□□□ 1.95
CDKN3-211ENST00000611205 HOXA11P31270 313 aaPredicted RBP27.21■■□□□ 1.95
CDKN3-211ENST00000611205 FERMT3Q86UX7 667 aa27.21■■□□□ 1.95
CDKN3-211ENST00000611205 KLHL5Q96PQ7 755 aa27.21■■□□□ 1.95
CDKN3-211ENST00000611205 MTRQ99707 1265 aa27.21■■□□□ 1.95
CDKN3-211ENST00000611205 TMEM175Q9BSA9 504 aa27.21■■□□□ 1.95
CDKN3-211ENST00000611205 SFXN1Q9H9B4 322 aa27.21■■□□□ 1.95
CDKN3-211ENST00000611205 KANSL3Q9P2N6 904 aa27.21■■□□□ 1.95
CDKN3-211ENST00000611205 ZBTB39O15060 712 aa27.2■■□□□ 1.94
CDKN3-211ENST00000611205 ASAP2O43150 1006 aa27.2■■□□□ 1.94
CDKN3-211ENST00000611205 GAS2O43903 313 aaKnown RBP27.2■■□□□ 1.94
CDKN3-211ENST00000611205 PLXNA3P51805 1871 aa27.2■■□□□ 1.94
CDKN3-211ENST00000611205 EARS2Q5JPH6 523 aaKnown RBP27.2■■□□□ 1.94
CDKN3-211ENST00000611205 ZDHHC14Q8IZN3 488 aa27.2■■□□□ 1.94
CDKN3-211ENST00000611205 PLCD3Q8N3E9 789 aa27.2■■□□□ 1.94
CDKN3-211ENST00000611205 ATOH1Q92858 354 aaPredicted RBP27.2■■□□□ 1.94
CDKN3-211ENST00000611205 ZSWIM4Q9H7M6 989 aa27.2■■□□□ 1.94
CDKN3-211ENST00000611205 STK39Q9UEW8 545 aa27.2■■□□□ 1.94
CDKN3-211ENST00000611205 TPCN1Q9ULQ1 816 aa27.2■■□□□ 1.94
CDKN3-211ENST00000611205 FAM205CA6NFA0 338 aa27.19■■□□□ 1.94
CDKN3-211ENST00000611205 NRP1O14786 923 aa27.19■■□□□ 1.94
CDKN3-211ENST00000611205 PFKFB2O60825 505 aa27.19■■□□□ 1.94
CDKN3-211ENST00000611205 BAG4O95429 457 aaKnown RBP27.19■■□□□ 1.94
CDKN3-211ENST00000611205 ITGA4P13612 1032 aa27.19■■□□□ 1.94
CDKN3-211ENST00000611205 NCLP19338 710 aaKnown RBP27.19■■□□□ 1.94
CDKN3-211ENST00000611205 TPH2Q8IWU9 490 aa27.19■■□□□ 1.94
CDKN3-211ENST00000611205 SLFN12Q8IYM2 578 aa27.19■■□□□ 1.94
CDKN3-211ENST00000611205 MRPL17Q9NRX2 175 aaKnown RBP27.19■■□□□ 1.94
CDKN3-211ENST00000611205 USTQ9Y2C2 406 aa27.19■■□□□ 1.94
CDKN3-211ENST00000611205 PRG3Q9Y2Y8 225 aaPredicted RBP27.19■■□□□ 1.94
CDKN3-211ENST00000611205 C2CD2LO14523 706 aa27.18■■□□□ 1.94
CDKN3-211ENST00000611205 CNPP09543 421 aaKnown RBP27.18■■□□□ 1.94
CDKN3-211ENST00000611205 CLCN4P51793 760 aa27.18■■□□□ 1.94
CDKN3-211ENST00000611205 GPR149Q86SP6 731 aa27.18■■□□□ 1.94
CDKN3-211ENST00000611205 SMG8Q8ND04 991 aaKnown RBP27.18■■□□□ 1.94
CDKN3-211ENST00000611205 CNNM3Q8NE01 707 aa27.18■■□□□ 1.94
CDKN3-211ENST00000611205 IRF2BPLQ9H1B7 796 aa27.18■■□□□ 1.94
CDKN3-211ENST00000611205 ORC3Q9UBD5 711 aaPredicted RBP27.18■■□□□ 1.94
CDKN3-211ENST00000611205 H0Y858 1186 aa27.17■■□□□ 1.94
CDKN3-211ENST00000611205 OR1G1P47890 313 aa27.17■■□□□ 1.94
CDKN3-211ENST00000611205 SPIRE1Q08AE8 756 aa27.17■■□□□ 1.94
CDKN3-211ENST00000611205 CCDC149Q6ZUS6 474 aa27.17■■□□□ 1.94
CDKN3-211ENST00000611205 ACSF2Q96CM8 615 aaPredicted RBP27.17■■□□□ 1.94
CDKN3-211ENST00000611205 CPB2Q96IY4 423 aa27.17■■□□□ 1.94
CDKN3-211ENST00000611205 EIF2AQ9BY44 585 aaKnown RBP27.17■■□□□ 1.94
CDKN3-211ENST00000611205 UBN1Q9NPG3 1134 aa27.17■■□□□ 1.94
CDKN3-211ENST00000611205 IPPQ9Y573 584 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms