RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 C9orf72Q96LT7 481 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 ACCSQ96QU6 501 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 DDX4Q9NQI0 724 aaKnown RBP11.12□□□□□ -0.63
CTCFL-216ENST00000608263 PRLRP16471 622 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 CCNA1P78396 465 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 CDK17Q00537 523 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 CXCL9Q07325 125 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 AP3B2Q13367 1082 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 GIT2Q14161 759 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 NEDD9Q14511 834 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 ZRSR2Q15696 482 aaKnown RBP11.12□□□□□ -0.63
CTCFL-216ENST00000608263 JAMLQ86YT9 394 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 DEPTORQ8TB45 409 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 RAPGEF5Q92565 580 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 C11orf70Q9BRQ4 267 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
CTCFL-216ENST00000608263 PCDHB4Q9Y5E5 795 aa11.12□□□□□ -0.63
CTCFL-216ENST00000608263 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.12□□□□□ -0.63
CTCFL-216ENST00000608263 NALCNQ8IZF0 1738 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 ATRNO75882 1429 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 TULP2O00295 520 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 IPO5O00410 1097 aaKnown RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 POLRMTO00411 1230 aaKnown RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 SPAG7O75391 227 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 VAMP7P51809 220 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 EIF3BP55884 814 aaKnown RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 C6orf118Q5T5N4 469 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 RNF207Q6ZRF8 634 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 RHOT2Q8IXI1 618 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 LRRC15Q8TF66 581 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 FAM20AQ96MK3 541 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 RMDN3Q96TC7 470 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 PDGFDQ9GZP0 370 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 SLITRK6Q9H5Y7 841 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 CNOT10Q9H9A5 744 aaKnown RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 ACP6Q9NPH0 428 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 KMT5AQ9NQR1 393 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 ZNF70Q9UC06 446 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 BRAFP15056 766 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 DMP1Q13316 513 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 RUNDC3BQ96NL0 473 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 AGPAT1Q99943 283 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 WDR11Q9BZH6 1224 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 RIOX1Q9H6W3 641 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 ACTR5Q9H9F9 607 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 SLC40A1Q9NP59 571 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 MYOZ2Q9NPC6 264 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 PPP1R9AQ9ULJ8 1098 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 PLEKHG2Q9H7P9 1386 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 TCP11X1B4DZS4 312 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 PI4K2BG5E9Z4 385 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 MSH4O15457 936 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 TLR2O60603 784 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 EYA4O95677 639 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 COMTP21964 271 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 OSBPP22059 807 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 POLGP54098 1239 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 EDRF1Q3B7T1 1238 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 MAP1SQ66K74 1059 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 KDM7AQ6ZMT4 941 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 SESTD1Q86VW0 696 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 ZFPM1Q8IX07 1006 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 EPS8L3Q8TE67 593 aaKnown RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 SLC20A1Q8WUM9 679 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 HAS1Q92839 578 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 AKT1S1Q96B36 256 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 FHDC1Q9C0D6 1143 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-216ENST00000608263 FBXO28Q9NVF7 368 aa11.11□□□□□ -0.63
CTCFL-216ENST00000608263 ESYT2A0FGR8 921 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 RPA1P27694 616 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 PRELPP51888 382 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 OSTNP61366 133 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 SEMA3FQ13275 785 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 TRPC3Q13507 836 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 KYNUQ16719 465 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 SLC35G1Q2M3R5 365 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 MTERF2Q49AM1 385 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 SYCP2LQ5T4T6 812 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 BSPRYQ5W0U4 402 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 MCUR1Q96AQ8 359 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 MTMR9Q96QG7 549 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 XPO6Q96QU8 1125 aaKnown RBP11.1□□□□□ -0.63
CTCFL-216ENST00000608263 FAM167BQ9BTA0 163 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 PI4K2AQ9BTU6 479 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 KIFC3Q9BVG8 833 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 BCAS3Q9H6U6 928 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 GPBP1L1Q9HC44 474 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-216ENST00000608263 SLC24A3Q9HC58 644 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 SLC5A4Q9NY91 659 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.1□□□□□ -0.63
CTCFL-216ENST00000608263 INO80B-WBP1J3KQ70 363 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 SGK1O00141 431 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 CA4P22748 312 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 GCKP35557 465 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 PIK3CAP42336 1068 aa11.1□□□□□ -0.63
CTCFL-216ENST00000608263 BFSP1Q12934 665 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms