RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	SMAD2	Q15796	467 aa	Known RBP	11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	CATSPER4	Q7RTX7	472 aa		11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	MRPS27	Q92552	414 aa	Known RBP	11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	TMEM143	Q96AN5	459 aa		11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	CCDC51	Q96ER9	411 aa		11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	ZNF668	Q96K58	619 aa	Predicted RBP	11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	SCLT1	Q96NL6	688 aa		11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	NACC1	Q96RE7	527 aa		11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	CDCA3	Q99618	268 aa	Predicted RBP	11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	LRFN3	Q9BTN0	628 aa		11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	MRPL9	Q9BYD2	267 aa	Known RBP	11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	NGRN	Q9NPE2	291 aa	Known RBP	11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	FAM105A	Q9NUU6	356 aa		11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	IRAK3	Q9Y616	596 aa		11.94	□□□□□ -0.5
TPM2-208	ENST00000607559	PI4K2B	G5E9Z4	385 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	LAD1	O00515	517 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	OFD1	O75665	1012 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	OR52Z1	P0C646	297 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	MCM7	P33993	719 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	MCM2	P49736	904 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	TOB1	P50616	345 aa	Predicted RBP	11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	ERVFC1	P60507	584 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	DLX2	Q07687	328 aa	Predicted RBP	11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	COASY	Q13057	564 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	AMHR2	Q16671	573 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	UBXN11	Q5T124	520 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	ABI1	Q8IZP0	508 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	SLC39A11	Q8N1S5	342 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	IGSF22	Q8N9C0	903 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	RNF149	Q8NC42	400 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	CNNM3	Q8NE01	707 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	NLRP4	Q96MN2	994 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	ZNF558	Q96NG5	402 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	MTR	Q99707	1265 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	CD320	Q9NPF0	282 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	TLR9	Q9NR96	1032 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	SPG21	Q9NZD8	308 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	CLEC1B	Q9P126	229 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	HCST	Q9UBK5	93 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	PUF60	Q9UHX1	559 aa	Known RBP	11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	PIN4	Q9Y237	131 aa	Known RBP	11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	KIF3A	Q9Y496	699 aa		11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.93	□□□□□ -0.5
TPM2-208	ENST00000607559	CNTNAP2	Q9UHC6	1331 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559		H3BQ06	376 aa	Predicted RBP	11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	MED24	O75448	989 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	SRGAP2C	P0DJJ0	459 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	ALAD	P13716	330 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	IL9	P15248	144 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	NCL	P19338	710 aa	Known RBP	11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	SSTR3	P32745	418 aa	Predicted RBP	11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	PRPH	P41219	470 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	GUCY1B3	Q02153	619 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	KRT17	Q04695	432 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	FAM187B	Q17R55	369 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	TTC38	Q5R3I4	469 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	TWF2	Q6IBS0	349 aa	Known RBP	11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	AGMO	Q6ZNB7	445 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	EP400NL	Q6ZTU2	488 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	KCTD17	Q8N5Z5	321 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	MRPL43	Q8N983	215 aa	Known RBP	11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	FAM184A	Q8NB25	1140 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	MCPH1	Q8NEM0	835 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	PIGO	Q8TEQ8	1089 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	PGBD4	Q96DM1	585 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	TMX3	Q96JJ7	454 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	TBC1D32	Q96NH3	1257 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	HS3ST6	Q96QI5	342 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	UBN1	Q9NPG3	1134 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	CLDND1	Q9NY35	253 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	KANSL3	Q9P2N6	904 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	STK39	Q9UEW8	545 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	HCN4	Q9Y3Q4	1203 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	PCDHB2	Q9Y5E7	798 aa		11.92	□□□□□ -0.5
TPM2-208	ENST00000607559	TRIO	O75962	3097 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559		A0A1B0GUA9	196 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	MBTPS2	O43462	519 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	TBX10	O75333	385 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	GLP2R	O95838	553 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	EFEMP2	O95967	443 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	GLRA2	P23416	452 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	PLA2G5	P39877	138 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	TEC	P42680	631 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	ALDH7A1	P49419	539 aa	Known RBP	11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	BCAR1	P56945	870 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	SMAD4	Q13485	552 aa	Known RBP	11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	CAPS	Q13938	189 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	TFDP1	Q14186	410 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	ZNF174	Q15697	407 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	DUSP6	Q16828	381 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	NOMO2	Q5JPE7	1267 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	GLB1L	Q6UWU2	654 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	ADGRD2	Q7Z7M1	963 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	ADHFE1	Q8IWW8	467 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	THNSL1	Q8IYQ7	743 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	SMRP1	Q8NCR6	262 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	ERMN	Q8TAM6	284 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	HELQ	Q8TDG4	1101 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	FAM122A	Q96E09	287 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms