RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 SLITRK3O94933 977 aa23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 HOXA11P31270 313 aaPredicted RBP23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 AGMOQ6ZNB7 445 aa23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 DDX53Q86TM3 631 aaKnown RBP23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 FERMT3Q86UX7 667 aa23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 ZNF280BQ86YH2 543 aa23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 RNF149Q8NC42 400 aa23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 KIF2CQ99661 725 aa23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 DNAJB4Q9UDY4 337 aa23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 PCDHA12Q9UN75 941 aa23.64■■□□□ 1.37
PPFIA3-209ENST00000602783 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 TMEM221A6NGB7 291 aa23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 M0R296 226 aa23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 SP100P23497 879 aaPredicted RBP23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 SLC11A1P49279 550 aa23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 GUCY1B3Q02153 619 aa23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 MRPL10Q7Z7H8 261 aaKnown RBP23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 URGCPQ8TCY9 931 aa23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 BCL7CQ8WUZ0 217 aaPredicted RBP23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 PBXIP1Q96AQ6 731 aa23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 FBXL18Q96ME1 805 aa23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 MTRQ99707 1265 aa23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 EIF2AK1Q9BQI3 630 aaKnown RBP23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 KCNH6Q9H252 994 aa23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 CDH22Q9UJ99 828 aa23.63■■□□□ 1.37
PPFIA3-209ENST00000602783 CTSAP10619 480 aa23.62■■□□□ 1.37
PPFIA3-209ENST00000602783 CALCRLQ16602 461 aa23.62■■□□□ 1.37
PPFIA3-209ENST00000602783 UBXN11Q5T124 520 aa23.62■■□□□ 1.37
PPFIA3-209ENST00000602783 CES5AQ6NT32 575 aa23.62■■□□□ 1.37
PPFIA3-209ENST00000602783 BMP8AQ7Z5Y6 402 aa23.62■■□□□ 1.37
PPFIA3-209ENST00000602783 ADAM7Q9H2U9 754 aa23.62■■□□□ 1.37
PPFIA3-209ENST00000602783 RSAD1Q9HA92 442 aa23.62■■□□□ 1.37
PPFIA3-209ENST00000602783 IRAK3Q9Y616 596 aa23.62■■□□□ 1.37
PPFIA3-209ENST00000602783 ZNF318Q5VUA4 2279 aa23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 B4GALT3O60512 393 aa23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 NEMFO60524 1076 aa23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 DDHD2O94830 711 aa23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 AFF1P51825 1210 aaKnown RBP23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 ITIH3Q06033 890 aa23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 GIT2Q14161 759 aa23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 FAM193BQ96PV7 902 aaPredicted RBP23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 HSD17B14Q9BPX1 270 aa23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 LLPHQ9BRT6 129 aaKnown RBP23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 TTC12Q9H892 705 aaPredicted RBP23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 XPNPEP1Q9NQW7 623 aa23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 TSHZ2Q9NRE2 1034 aa23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 KANSL3Q9P2N6 904 aa23.61■■□□□ 1.37
PPFIA3-209ENST00000602783 ERLIN2O94905 339 aa23.6■■□□□ 1.37
PPFIA3-209ENST00000602783 ALDH2P05091 517 aa23.6■■□□□ 1.37
PPFIA3-209ENST00000602783 TXKP42681 527 aa23.6■■□□□ 1.37
PPFIA3-209ENST00000602783 MXD4Q14582 209 aaPredicted RBP23.6■■□□□ 1.37
PPFIA3-209ENST00000602783 SAFBQ15424 915 aaKnown RBP eCLIP23.6■■□□□ 1.37
PPFIA3-209ENST00000602783 C12orf76Q8N812 135 aaPredicted RBP23.6■■□□□ 1.37
PPFIA3-209ENST00000602783 C8orf76Q96K31 380 aa23.6■■□□□ 1.37
PPFIA3-209ENST00000602783 CNTNAP2Q9UHC6 1331 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 LYPLA2O95372 231 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 POMCP01189 267 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 WEE2P0C1S8 567 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 EPCAMP16422 314 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 NCLP19338 710 aaKnown RBP23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 PTENP60484 403 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 SIGLEC14Q08ET2 396 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 RARS2Q5T160 578 aaKnown RBP23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 ZBTB33Q86T24 672 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 ALYREFQ86V81 257 aaKnown RBP23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 ZSCAN31Q96LW9 406 aaPredicted RBP23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 NECTIN4Q96NY8 510 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 VN1R3Q9BXE9 311 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 POMKQ9H5K3 350 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 FAN1Q9Y2M0 1017 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 NR2E1Q9Y466 385 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 PIEZO1Q92508 2521 aa23.59■■□□□ 1.37
PPFIA3-209ENST00000602783 INO80B-WBP1J3KQ70 363 aa23.58■■□□□ 1.37
PPFIA3-209ENST00000602783 ITGA4P13612 1032 aa23.58■■□□□ 1.37
PPFIA3-209ENST00000602783 TFDP1Q14186 410 aa23.58■■□□□ 1.37
PPFIA3-209ENST00000602783 PTPN21Q16825 1174 aa23.58■■□□□ 1.37
PPFIA3-209ENST00000602783 KANK3Q6NY19 840 aa23.58■■□□□ 1.37
PPFIA3-209ENST00000602783 SMG8Q8ND04 991 aaKnown RBP23.58■■□□□ 1.37
PPFIA3-209ENST00000602783 CNNM3Q8NE01 707 aa23.58■■□□□ 1.37
PPFIA3-209ENST00000602783 CCDC43Q96MW1 224 aaKnown RBP23.58■■□□□ 1.37
PPFIA3-209ENST00000602783 SH2B1Q9NRF2 756 aaPredicted RBP23.58■■□□□ 1.37
PPFIA3-209ENST00000602783 ANKEF1Q9NU02 776 aa23.58■■□□□ 1.37
PPFIA3-209ENST00000602783 WDFY4Q6ZS81 3184 aa23.58■■□□□ 1.36
PPFIA3-209ENST00000602783 A0A087WWV3 80 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 TSPAN1O60635 241 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 DGAT1O75907 488 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 SSBP05455 408 aaKnown RBP eCLIP23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 ATP2B1P20020 1258 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 AXLP30530 894 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 MTHFRP42898 656 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 RBM25P49756 843 aaKnown RBP23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 HMGN5P82970 282 aaKnown RBP23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 NHLH1Q02575 133 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 NCBP1Q09161 790 aaKnown RBP23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 PCBP1Q15365 356 aaKnown RBP eCLIP23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 ASAP3Q8TDY4 903 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 SLC22A17Q8WUG5 538 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 CPB2Q96IY4 423 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 RIPOR3Q96MK2 946 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 MTMR9Q96QG7 549 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms