RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PPP2R5AQ15172 486 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 BRDTQ58F21 947 aaPredicted RBP18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 CDCA2Q69YH5 1023 aaPredicted RBP18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 TCP11Q8WWU5 503 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 L2HGDHQ9H9P8 463 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 PRDM10Q9NQV6 1147 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 DMAC2Q9NW81 257 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 HDAC6Q9UBN7 1215 aa18.98■□□□□ 0.63
PPFIA3-207ENST00000602716 N4BP3O15049 544 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 TUBB4AP04350 444 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 ZSCAN20P17040 1043 aaPredicted RBP18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 NKX3-2P78367 333 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 CCDC40Q4G0X9 1142 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 CCSAPQ6IQ19 270 aaPredicted RBP18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 HS2ST1Q7LGA3 356 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 KLHDC9Q8NEP7 349 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 HVCN1Q96D96 273 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 CCDC113Q9H0I3 377 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 TMX1Q9H3N1 280 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 TMEM206Q9H813 350 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 MINDY3Q9H8M7 445 aa18.97■□□□□ 0.63
PPFIA3-207ENST00000602716 LGALS16A8MUM7 142 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 CETN3O15182 167 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 CSDE1O75534 798 aaKnown RBP18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 SLU7O95391 586 aaKnown RBP18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 MYCP01106 439 aaPredicted RBP18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 PBX1P40424 430 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 ADAM17P78536 824 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 NFRKBQ6P4R8 1299 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 FAM114A1Q8IWE2 563 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 KIAA0319LQ8IZA0 1049 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 SLC17A8Q8NDX2 589 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 JPH2Q9BR39 696 aaPredicted RBP18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 FAM49AQ9H0Q0 323 aaPredicted RBP18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 AKT3Q9Y243 479 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 MBLAC1A4D2B0 266 aaPredicted RBP18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 MAGEB2O15479 319 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 KCNA10Q16322 511 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 NFIL3Q16649 462 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 CCDC155Q8N6L0 562 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 RETREG2Q8NC44 543 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 HAPLN2Q9GZV7 340 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 OGFRQ9NZT2 677 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 PHLPP2Q6ZVD8 1323 aa18.96■□□□□ 0.63
PPFIA3-207ENST00000602716 PES1O00541 588 aaKnown RBP18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 HNRNPDLO14979 420 aaKnown RBP18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 TREHO43280 583 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 CCP110O43303 1012 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 ASGR1P07306 291 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 HOXC8P31273 242 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 GOLGA8FQ08AF8 430 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 GOLGA8DPQ0D2H9 430 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 TMEM62Q0P6H9 643 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 MXD4Q14582 209 aaPredicted RBP18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 LHX8Q68G74 356 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 TRIM59Q8IWR1 403 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 SAAL1Q96ER3 474 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 MTG1Q9BT17 334 aaPredicted RBP18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 NOC4LQ9BVI4 516 aaKnown RBP18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 IFT122Q9HBG6 1241 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 SPC25Q9HBM1 224 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 NRCAMQ92823 1304 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 GOLGA8IPA6NC78 632 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 GOLGA8JA6NMD2 632 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 FGFR1OPO95684 399 aaKnown RBP18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 IQCF3P0C7M6 154 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 PRMT2P55345 433 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 NBPF20Q3BBV1 942 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 SYT10Q6XYQ8 523 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 EXOC8Q8IYI6 725 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 ZNF397Q8NF99 534 aaPredicted RBP18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 BICD1Q96G01 975 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 BORCS6Q96GS4 357 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 ZBTB45Q96K62 511 aaPredicted RBP18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 CTAGE1Q96RT6 745 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 TARS2Q9BW92 718 aaKnown RBP18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 HSPBP1Q9NZL4 362 aa18.95■□□□□ 0.62
PPFIA3-207ENST00000602716 SCN10AQ9Y5Y9 1956 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 GRIN2DO15399 1336 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 A0A087WZ62 844 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 CST5P28325 142 aaPredicted RBP18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 KLK7P49862 253 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 MARSP56192 900 aaKnown RBP18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 MBTD1Q05BQ5 628 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 DMTNQ08495 405 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 ARHGEF6Q15052 776 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 RDH13Q8NBN7 331 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 ANKRD20A12PQ8NF67 263 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 KCNN1Q92952 543 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 FDXACB1Q9BRP7 624 aaPredicted RBP18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 KATNAL1Q9BW62 490 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 PRDM4Q9UKN5 801 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 PTPN22Q9Y2R2 807 aa18.94■□□□□ 0.62
PPFIA3-207ENST00000602716 RRN3P2A6NIE6 340 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 K7ERI5 159 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 B4GALT5O43286 388 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 MSCO60682 206 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 ADRB2P07550 413 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 DNM2P50570 870 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 PTENP60484 403 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms