RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 CES5AQ6NT32 575 aa18.95■□□□□ 0.62
SCAF1-204ENST00000601038 ZNF280BQ86YH2 543 aa18.95■□□□□ 0.62
SCAF1-204ENST00000601038 NSUN7Q8NE18 718 aaKnown RBP18.95■□□□□ 0.62
SCAF1-204ENST00000601038 URGCPQ8TCY9 931 aa18.95■□□□□ 0.62
SCAF1-204ENST00000601038 EIF2AK1Q9BQI3 630 aaKnown RBP18.95■□□□□ 0.62
SCAF1-204ENST00000601038 ADAM7Q9H2U9 754 aa18.95■□□□□ 0.62
SCAF1-204ENST00000601038 KANSL3Q9P2N6 904 aa18.95■□□□□ 0.62
SCAF1-204ENST00000601038 DNAJB4Q9UDY4 337 aa18.95■□□□□ 0.62
SCAF1-204ENST00000601038 CNTNAP2Q9UHC6 1331 aa18.95■□□□□ 0.62
SCAF1-204ENST00000601038 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.94■□□□□ 0.62
SCAF1-204ENST00000601038 TMEM221A6NGB7 291 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 BTBD18B2RXH4 712 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 M0R296 226 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 NEK4P51957 841 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 CALCRLQ16602 461 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 UBXN11Q5T124 520 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 TMEM87AQ8NBN3 555 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 CNNM3Q8NE01 707 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 FBXL18Q96ME1 805 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 NECTIN4Q96NY8 510 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 GBP3Q9H0R5 595 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 TTC12Q9H892 705 aaPredicted RBP18.94■□□□□ 0.62
SCAF1-204ENST00000601038 RSAD1Q9HA92 442 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 XPNPEP1Q9NQW7 623 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 ANKEF1Q9NU02 776 aa18.94■□□□□ 0.62
SCAF1-204ENST00000601038 ERLIN2O94905 339 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 ALDH2P05091 517 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 NCLP19338 710 aaKnown RBP18.93■□□□□ 0.62
SCAF1-204ENST00000601038 AXLP30530 894 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 SLC11A1P49279 550 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 PTENP60484 403 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 POU5F1BQ06416 359 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 TRIM29Q14134 588 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 TFDP1Q14186 410 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 IFNLR1Q8IU57 520 aaPredicted RBP18.93■□□□□ 0.62
SCAF1-204ENST00000601038 DIS3L2Q8IYB7 885 aaKnown RBP18.93■□□□□ 0.62
SCAF1-204ENST00000601038 BCL7CQ8WUZ0 217 aaPredicted RBP18.93■□□□□ 0.62
SCAF1-204ENST00000601038 AUTS2Q8WXX7 1259 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 PBXIP1Q96AQ6 731 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 FAM193BQ96PV7 902 aaPredicted RBP18.93■□□□□ 0.62
SCAF1-204ENST00000601038 STK39Q9UEW8 545 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 NR2E1Q9Y466 385 aa18.93■□□□□ 0.62
SCAF1-204ENST00000601038 ZNF318Q5VUA4 2279 aa18.92■□□□□ 0.62
SCAF1-204ENST00000601038 B4GALT3O60512 393 aa18.92■□□□□ 0.62
SCAF1-204ENST00000601038 NEMFO60524 1076 aa18.92■□□□□ 0.62
SCAF1-204ENST00000601038 DGAT1O75907 488 aa18.92■□□□□ 0.62
SCAF1-204ENST00000601038 DDHD2O94830 711 aa18.92■□□□□ 0.62
SCAF1-204ENST00000601038 AFF1P51825 1210 aaKnown RBP18.92■□□□□ 0.62
SCAF1-204ENST00000601038 SIGLEC14Q08ET2 396 aa18.92■□□□□ 0.62
SCAF1-204ENST00000601038 SMG8Q8ND04 991 aaKnown RBP18.92■□□□□ 0.62
SCAF1-204ENST00000601038 MTMR9Q96QG7 549 aa18.92■□□□□ 0.62
SCAF1-204ENST00000601038 TMEM175Q9BSA9 504 aa18.92■□□□□ 0.62
SCAF1-204ENST00000601038 UBN1Q9NPG3 1134 aa18.92■□□□□ 0.62
SCAF1-204ENST00000601038 DZANK1Q9NVP4 752 aa18.92■□□□□ 0.62
SCAF1-204ENST00000601038 WNT7AO00755 349 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 TSPAN1O60635 241 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 JAK2O60674 1132 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 XRCC6P12956 609 aaKnown RBP eCLIP18.91■□□□□ 0.62
SCAF1-204ENST00000601038 TXKP42681 527 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 MTHFRP42898 656 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 NCBP1Q09161 790 aaKnown RBP18.91■□□□□ 0.62
SCAF1-204ENST00000601038 PTPN21Q16825 1174 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 NOTUMQ6P988 496 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 PPFIBP1Q86W92 1011 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 SLC22A17Q8WUG5 538 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 CCDC51Q96ER9 411 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 RIPOR3Q96MK2 946 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 VN1R3Q9BXE9 311 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 POMKQ9H5K3 350 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 CDH22Q9UJ99 828 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 FAN1Q9Y2M0 1017 aa18.91■□□□□ 0.62
SCAF1-204ENST00000601038 ARID2Q68CP9 1835 aa18.9■□□□□ 0.62
SCAF1-204ENST00000601038 INO80B-WBP1J3KQ70 363 aa18.9■□□□□ 0.62
SCAF1-204ENST00000601038 POMCP01189 267 aa18.9■□□□□ 0.62
SCAF1-204ENST00000601038 ITGA4P13612 1032 aa18.9■□□□□ 0.62
SCAF1-204ENST00000601038 SP100P23497 879 aaPredicted RBP18.9■□□□□ 0.62
SCAF1-204ENST00000601038 ARL2P36404 184 aa18.9■□□□□ 0.62
SCAF1-204ENST00000601038 RARRES1P49788 294 aa18.9■□□□□ 0.62
SCAF1-204ENST00000601038 PTPN14Q15678 1187 aa18.9■□□□□ 0.62
SCAF1-204ENST00000601038 NFKBIZQ9BYH8 718 aa18.9■□□□□ 0.62
SCAF1-204ENST00000601038 TSHZ2Q9NRE2 1034 aa18.9■□□□□ 0.62
SCAF1-204ENST00000601038 IPPQ9Y573 584 aa18.9■□□□□ 0.62
SCAF1-204ENST00000601038 NRP1O14786 923 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 INPPL1O15357 1258 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 EPCAMP16422 314 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 FOSBP53539 338 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 NHLH1Q02575 133 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 MBTD1Q05BQ5 628 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 CAPSQ13938 189 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 ATAT1Q5SQI0 421 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 RARS2Q5T160 578 aaKnown RBP18.89■□□□□ 0.61
SCAF1-204ENST00000601038 FBXL6Q8N531 539 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 C12orf76Q8N812 135 aaPredicted RBP18.89■□□□□ 0.61
SCAF1-204ENST00000601038 ASAP3Q8TDY4 903 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 ASIC4Q96FT7 647 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 CPB2Q96IY4 423 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 CCDC43Q96MW1 224 aaKnown RBP18.89■□□□□ 0.61
SCAF1-204ENST00000601038 EMILIN2Q9BXX0 1053 aa18.89■□□□□ 0.61
SCAF1-204ENST00000601038 EIF2AQ9BY44 585 aaKnown RBP18.89■□□□□ 0.61
SCAF1-204ENST00000601038 CSRNP2Q9H175 543 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms