RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 BRF1Q92994 677 aa18.81■□□□□ 0.6
USE1-208ENST00000600970 RNF26Q9BY78 433 aaPredicted RBP18.81■□□□□ 0.6
USE1-208ENST00000600970 RSAD1Q9HA92 442 aa18.81■□□□□ 0.6
USE1-208ENST00000600970 WDR6Q9NNW5 1121 aaKnown RBP18.81■□□□□ 0.6
USE1-208ENST00000600970 KANSL3Q9P2N6 904 aa18.81■□□□□ 0.6
USE1-208ENST00000600970 SPTBN4Q9H254 2564 aa18.81■□□□□ 0.6
USE1-208ENST00000600970 INPPL1O15357 1258 aa18.8■□□□□ 0.6
USE1-208ENST00000600970 SOD2P04179 222 aa18.8■□□□□ 0.6
USE1-208ENST00000600970 GBP2P32456 591 aaPredicted RBP18.8■□□□□ 0.6
USE1-208ENST00000600970 AK2P54819 239 aa18.8■□□□□ 0.6
USE1-208ENST00000600970 PLA2G4FQ68DD2 849 aa18.8■□□□□ 0.6
USE1-208ENST00000600970 JPH2Q9BR39 696 aaPredicted RBP18.8■□□□□ 0.6
USE1-208ENST00000600970 HERC2P3Q9BVR0 1158 aa18.8■□□□□ 0.6
USE1-208ENST00000600970 SLC26A6Q9BXS9 759 aa18.8■□□□□ 0.6
USE1-208ENST00000600970 SEMA4AQ9H3S1 761 aa18.8■□□□□ 0.6
USE1-208ENST00000600970 MARCH5Q9NX47 278 aa18.8■□□□□ 0.6
USE1-208ENST00000600970 CLUHO75153 1309 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 CNTNAP2Q9UHC6 1331 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 CYP3A7-CYP3A51PA0A087WV96 503 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 TDP2O95551 362 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 POMCP01189 267 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 LMNAP02545 664 aaKnown RBP18.79■□□□□ 0.6
USE1-208ENST00000600970 URODP06132 367 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 CYP3A7P24462 503 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 BMP2KLQ5H9B9 411 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 UBXN11Q5T124 520 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 CYP26C1Q6V0L0 522 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 TAS1R1Q7RTX1 841 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 SLC44A3Q8N4M1 653 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 KCNG4Q8TDN1 519 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 RPS6KC1Q96S38 1066 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 RHOBTB2Q9BYZ6 727 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 EPS15L1Q9UBC2 864 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 CA14Q9ULX7 337 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 SSX2IPQ9Y2D8 614 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 COL4A3BPQ9Y5P4 624 aa18.79■□□□□ 0.6
USE1-208ENST00000600970 MTCL1Q9Y4B5 1905 aaKnown RBP18.78■□□□□ 0.6
USE1-208ENST00000600970 TEX28O15482 410 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 ADH1AP07327 375 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 MYBP10242 640 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 HOXA11P31270 313 aaPredicted RBP18.78■□□□□ 0.6
USE1-208ENST00000600970 NLRP5P59047 1200 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 PSMC5P62195 406 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 NONOQ15233 471 aaKnown RBP eCLIP18.78■□□□□ 0.6
USE1-208ENST00000600970 ETNPPLQ8TBG4 499 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 STAMQ92783 540 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 MYADMQ96S97 322 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 MINDY3Q9H8M7 445 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 SH3GLB2Q9NR46 395 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 PRG3Q9Y2Y8 225 aaPredicted RBP18.78■□□□□ 0.6
USE1-208ENST00000600970 R4GN57 208 aa18.78■□□□□ 0.6
USE1-208ENST00000600970 RIF1Q5UIP0 2472 aaKnown RBP18.78■□□□□ 0.6
USE1-208ENST00000600970 DOCK8Q8NF50 2099 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 TDRD15B5MCY1 1934 aaKnown RBP18.77■□□□□ 0.6
USE1-208ENST00000600970 RFPL2O75678 378 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 EFEMP2O95967 443 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 GLUD1P00367 558 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 SRFP11831 508 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 IFNAR1P17181 557 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 NCLP19338 710 aaKnown RBP18.77■□□□□ 0.6
USE1-208ENST00000600970 RFX1P22670 979 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 NPEPPSP55786 919 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 KIAA0319Q5VV43 1072 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 SRGAP1Q7Z6B7 1085 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 COLGALT2Q8IYK4 626 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 RNF168Q8IYW5 571 aaPredicted RBP18.77■□□□□ 0.6
USE1-208ENST00000600970 RIN2Q8WYP3 895 aaPredicted RBP18.77■□□□□ 0.6
USE1-208ENST00000600970 NXPE3Q969Y0 559 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 RMDN1Q96DB5 314 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 MBOAT7Q96N66 472 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 C22orf23Q9BZE7 217 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 TBC1D17Q9HA65 648 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 RXFP1Q9HBX9 757 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 DPP7Q9UHL4 492 aa18.77■□□□□ 0.6
USE1-208ENST00000600970 EML1O00423 815 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 SRGAP2CP0DJJ0 459 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 OR1G1P47890 313 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 GLUD2P49448 558 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 ELMSAN1Q6PJG2 1045 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 FBXL16Q8N461 479 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 ZNF579Q8NAF0 562 aaKnown RBP18.76■□□□□ 0.59
USE1-208ENST00000600970 SMG8Q8ND04 991 aaKnown RBP18.76■□□□□ 0.59
USE1-208ENST00000600970 GPR152Q8TDT2 470 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 PRPF31Q8WWY3 499 aaKnown RBP18.76■□□□□ 0.59
USE1-208ENST00000600970 SLC7A3Q8WY07 619 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 SMG7Q92540 1137 aaKnown RBP18.76■□□□□ 0.59
USE1-208ENST00000600970 KCNB2Q92953 911 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 ZNF707Q96C28 371 aaPredicted RBP18.76■□□□□ 0.59
USE1-208ENST00000600970 JAKMIP1Q96N16 626 aaKnown RBP18.76■□□□□ 0.59
USE1-208ENST00000600970 AGXT2Q9BYV1 514 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 PCDHA4Q9UN74 947 aa18.76■□□□□ 0.59
USE1-208ENST00000600970 FANCMQ8IYD8 2048 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 M0R2N6 131 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 PAPLNO95428 1278 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 DCNP07585 359 aaKnown RBP18.75■□□□□ 0.59
USE1-208ENST00000600970 SPATA31D3P0C874 917 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 SPECC1Q5M775 1068 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 BLOC1S2Q6QNY1 142 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 SPATA31D4Q6ZUB0 917 aa18.75■□□□□ 0.59
USE1-208ENST00000600970 SKAP1Q86WV1 359 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms