RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 RSAD2Q8WXG1 361 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 BRF1Q92994 677 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 ZNF707Q96C28 371 aaPredicted RBP6.87□□□□□ -1.31
VRK3-220ENST00000600259 ACSF2Q96CM8 615 aaPredicted RBP6.87□□□□□ -1.31
VRK3-220ENST00000600259 MYADMQ96S97 322 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 RTP3Q9BQQ7 232 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 TMEM175Q9BSA9 504 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 TEKT3Q9BXF9 490 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 RNF26Q9BY78 433 aaPredicted RBP6.87□□□□□ -1.31
VRK3-220ENST00000600259 INO80BQ9C086 356 aaPredicted RBP6.87□□□□□ -1.31
VRK3-220ENST00000600259 DHX33Q9H6R0 707 aaKnown RBP6.87□□□□□ -1.31
VRK3-220ENST00000600259 SFXN1Q9H9B4 322 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 WDR6Q9NNW5 1121 aaKnown RBP6.87□□□□□ -1.31
VRK3-220ENST00000600259 AGPAT5Q9NUQ2 364 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 MARCH5Q9NX47 278 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 MIOSQ9NXC5 875 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 DLGAP2Q9P1A6 1054 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 VPS54Q9P1Q0 977 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 IGSF9Q9P2J2 1179 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 WRAP73Q9P2S5 460 aaPredicted RBP6.87□□□□□ -1.31
VRK3-220ENST00000600259 WNT16Q9UBV4 365 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 PIN4Q9Y237 131 aaKnown RBP6.87□□□□□ -1.31
VRK3-220ENST00000600259 INPP5FQ9Y2H2 1132 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 PCDHB2Q9Y5E7 798 aa6.87□□□□□ -1.31
VRK3-220ENST00000600259 CCDC195A0A1B0GUA6 201 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 DDX11L8A8MPP1 907 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 F8W810 466 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 TEX28O15482 410 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 C1RP00736 705 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 SOD2P04179 222 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 HMGB1P09429 215 aaKnown RBP6.86□□□□□ -1.31
VRK3-220ENST00000600259 NCLP19338 710 aaKnown RBP6.86□□□□□ -1.31
VRK3-220ENST00000600259 SFPQP23246 707 aaKnown RBP eCLIP6.86□□□□□ -1.31
VRK3-220ENST00000600259 PDIA3P30101 505 aaKnown RBP6.86□□□□□ -1.31
VRK3-220ENST00000600259 ID4P47928 161 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 DNM2P50570 870 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 RAB27AP51159 221 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 RNASELQ05823 741 aaKnown RBP6.86□□□□□ -1.31
VRK3-220ENST00000600259 DSC1Q08554 894 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 KRT32Q14532 448 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 CYP26C1Q6V0L0 522 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 CATSPER4Q7RTX7 472 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 RHPN2Q8IUC4 686 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 COLGALT2Q8IYK4 626 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 SIX5Q8N196 739 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 GSTCDQ8NEC7 633 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 BICD2Q8TD16 824 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 PRPF31Q8WWY3 499 aaKnown RBP6.86□□□□□ -1.31
VRK3-220ENST00000600259 PGBD4Q96DM1 585 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 YTHDC1Q96MU7 727 aaKnown RBP6.86□□□□□ -1.31
VRK3-220ENST00000600259 RPS6KC1Q96S38 1066 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 EMILIN2Q9BXX0 1053 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 GBP3Q9H0R5 595 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 MFSD1Q9H3U5 465 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 NCOA5Q9HCD5 579 aaKnown RBP6.86□□□□□ -1.31
VRK3-220ENST00000600259 SH3GLB2Q9NR46 395 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 CHST7Q9NS84 486 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 EPS15L1Q9UBC2 864 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 SEPT9Q9UHD8 586 aaPredicted RBP6.86□□□□□ -1.31
VRK3-220ENST00000600259 VAV3Q9UKW4 847 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 FAN1Q9Y2M0 1017 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 SNX14Q9Y5W7 946 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 EPG5Q9HCE0 2579 aa6.86□□□□□ -1.31
VRK3-220ENST00000600259 MYH9P35579 1960 aaKnown RBP6.86□□□□□ -1.31
VRK3-220ENST00000600259 CNTNAP2Q9UHC6 1331 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 ANHXE9PGG2 379 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 ZBTB39O15060 712 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 SLC37A4O43826 429 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 RFPL2O75678 378 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 POMCP01189 267 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 SSBP05455 408 aaKnown RBP eCLIP6.85□□□□□ -1.31
VRK3-220ENST00000600259 GLULP15104 373 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 RPS6KB1P23443 525 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 HSPA4P34932 840 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 CA8P35219 290 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 PSMC5P62195 406 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 DSG1Q02413 1049 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 LAMTOR4Q0VGL1 99 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 AMHR2Q16671 573 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 PLA2G4FQ68DD2 849 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 PHLDB3Q6NSJ2 640 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 MOXD1Q6UVY6 613 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 SRGAP1Q7Z6B7 1085 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 GPR65Q8IYL9 337 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 MAML2Q8IZL2 1156 aaPredicted RBP6.85□□□□□ -1.31
VRK3-220ENST00000600259 TMEM87AQ8NBN3 555 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 DAGLBQ8NCG7 672 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 HDAC7Q8WUI4 952 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 HAS1Q92839 578 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 NXPE3Q969Y0 559 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 TMEM143Q96AN5 459 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 RMDN1Q96DB5 314 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 NLRP4Q96MN2 994 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 SCLT1Q96NL6 688 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 HERC2P3Q9BVR0 1158 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 SLC26A6Q9BXS9 759 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 EIF2AQ9BY44 585 aaKnown RBP6.85□□□□□ -1.31
VRK3-220ENST00000600259 NT5C3AQ9H0P0 336 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 SEMA4AQ9H3S1 761 aa6.85□□□□□ -1.31
VRK3-220ENST00000600259 RSAD1Q9HA92 442 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms