RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 HAS1Q92839 578 aa16.31■□□□□ 0.2
EBI3-202ENST00000599339 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 MEIS3P2A8K0S8 358 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 SLC11A1P49279 550 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 MTMR3Q13615 1198 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 MXD4Q14582 209 aaPredicted RBP16.3■□□□□ 0.2
EBI3-202ENST00000599339 RARS2Q5T160 578 aaKnown RBP16.3■□□□□ 0.2
EBI3-202ENST00000599339 AGMOQ6ZNB7 445 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 MRPL10Q7Z7H8 261 aaKnown RBP16.3■□□□□ 0.2
EBI3-202ENST00000599339 ZNF579Q8NAF0 562 aaKnown RBP16.3■□□□□ 0.2
EBI3-202ENST00000599339 RNF149Q8NC42 400 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 OXER1Q8TDS5 423 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 DYDC2Q96IM9 177 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 CCDC43Q96MW1 224 aaKnown RBP16.3■□□□□ 0.2
EBI3-202ENST00000599339 MTRQ99707 1265 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 TMEM175Q9BSA9 504 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 EMILIN2Q9BXX0 1053 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 POMKQ9H5K3 350 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 UBN1Q9NPG3 1134 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 BMP2KQ9NSY1 1161 aaPredicted RBP16.3■□□□□ 0.2
EBI3-202ENST00000599339 RGL1Q9NZL6 768 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 WRAP73Q9P2S5 460 aaPredicted RBP16.3■□□□□ 0.2
EBI3-202ENST00000599339 DNAJB4Q9UDY4 337 aa16.3■□□□□ 0.2
EBI3-202ENST00000599339 ALDH2P05091 517 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 AXLP30530 894 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 CYP4A11Q02928 519 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 TFDP1Q14186 410 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 CTTNQ14247 550 aaKnown RBP16.29■□□□□ 0.2
EBI3-202ENST00000599339 KIAA1841Q6NSI8 718 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 FERMT3Q86UX7 667 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 CABP7Q86V35 215 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 UBALD2Q8IYN6 164 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 TDRD5Q8NAT2 981 aaKnown RBP16.29■□□□□ 0.2
EBI3-202ENST00000599339 AUTS2Q8WXX7 1259 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 CCDC51Q96ER9 411 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 ASIC4Q96FT7 647 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 MINDY3Q9H8M7 445 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 GJB4Q9NTQ9 266 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 DBR1Q9UK59 544 aaKnown RBP16.29■□□□□ 0.2
EBI3-202ENST00000599339 SORCS3Q9UPU3 1222 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 FAN1Q9Y2M0 1017 aa16.29■□□□□ 0.2
EBI3-202ENST00000599339 C2CD4DB7Z1M9 353 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 ITGA4P13612 1032 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 EPCAMP16422 314 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 NCLP19338 710 aaKnown RBP16.28■□□□□ 0.2
EBI3-202ENST00000599339 HOXA11P31270 313 aaPredicted RBP16.28■□□□□ 0.2
EBI3-202ENST00000599339 AK2P54819 239 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 SPIRE1Q08AE8 756 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 PTPN14Q15678 1187 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 ZNF280BQ86YH2 543 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 TPH2Q8IWU9 490 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 HACE1Q8IYU2 909 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 PLCD3Q8N3E9 789 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 KREMEN2Q8NCW0 462 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 PRSS33Q8NF86 280 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 SLC22A17Q8WUG5 538 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 BCL7CQ8WUZ0 217 aaPredicted RBP16.28■□□□□ 0.2
EBI3-202ENST00000599339 IRF2BPLQ9H1B7 796 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 SFXN1Q9H9B4 322 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 CDH22Q9UJ99 828 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 PCDHA12Q9UN75 941 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 USTQ9Y2C2 406 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 SSX2IPQ9Y2D8 614 aa16.28■□□□□ 0.2
EBI3-202ENST00000599339 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.2
EBI3-202ENST00000599339 DGAT1O75907 488 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 DDHD2O94830 711 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 CTDNEP1O95476 244 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 KLRC2P26717 231 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 NR5A1Q13285 461 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 TRIM29Q14134 588 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 CALCRLQ16602 461 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 EARS2Q5JPH6 523 aaKnown RBP16.27■□□□□ 0.2
EBI3-202ENST00000599339 UBXN11Q5T124 520 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 IER5LQ5T953 404 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 NOTUMQ6P988 496 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 ELMSAN1Q6PJG2 1045 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 ZDHHC14Q8IZN3 488 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 C12orf76Q8N812 135 aaPredicted RBP16.27■□□□□ 0.2
EBI3-202ENST00000599339 MRPL17Q9NRX2 175 aaKnown RBP16.27■□□□□ 0.2
EBI3-202ENST00000599339 ANKEF1Q9NU02 776 aa16.27■□□□□ 0.2
EBI3-202ENST00000599339 ARID2Q68CP9 1835 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 INO80B-WBP1J3KQ70 363 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 NR1I2O75469 434 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 SLITRK3O94933 977 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 LYPLA2O95372 231 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 POMCP01189 267 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 SSBP05455 408 aaKnown RBP eCLIP16.26■□□□□ 0.19
EBI3-202ENST00000599339 URODP06132 367 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 WEE2P0C1S8 567 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 NUBP1P53384 320 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 PTENP60484 403 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 POU5F1BQ06416 359 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 IFNLR1Q8IU57 520 aaPredicted RBP16.26■□□□□ 0.19
EBI3-202ENST00000599339 GTF3C6Q969F1 213 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 ACSF2Q96CM8 615 aaPredicted RBP16.26■□□□□ 0.19
EBI3-202ENST00000599339 EIF2AK1Q9BQI3 630 aaKnown RBP16.26■□□□□ 0.19
EBI3-202ENST00000599339 TRIM6Q9C030 488 aaPredicted RBP16.26■□□□□ 0.19
EBI3-202ENST00000599339 DPP7Q9UHL4 492 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 IPPQ9Y573 584 aa16.26■□□□□ 0.19
EBI3-202ENST00000599339 WDFY4Q6ZS81 3184 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms