RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 MGAT3Q09327 533 aa24.01■■□□□ 1.43
LTBP4-224ENST00000599016 PCBP1Q15365 356 aaKnown RBP eCLIP24.01■■□□□ 1.43
LTBP4-224ENST00000599016 KNOP1Q1ED39 458 aaKnown RBP24.01■■□□□ 1.43
LTBP4-224ENST00000599016 MAP4K3Q8IVH8 894 aa24.01■■□□□ 1.43
LTBP4-224ENST00000599016 CDHR5Q9HBB8 845 aa24.01■■□□□ 1.43
LTBP4-224ENST00000599016 SFPQP23246 707 aaKnown RBP eCLIP24■■□□□ 1.43
LTBP4-224ENST00000599016 EIF4BP23588 611 aaKnown RBP24■■□□□ 1.43
LTBP4-224ENST00000599016 ERCC5P28715 1186 aaPredicted RBP24■■□□□ 1.43
LTBP4-224ENST00000599016 FAAP100Q0VG06 881 aa24■■□□□ 1.43
LTBP4-224ENST00000599016 PAK1Q13153 545 aa24■■□□□ 1.43
LTBP4-224ENST00000599016 ZNF618Q5T7W0 954 aa24■■□□□ 1.43
LTBP4-224ENST00000599016 NELFBQ8WX92 580 aa24■■□□□ 1.43
LTBP4-224ENST00000599016 BICD1Q96G01 975 aa24■■□□□ 1.43
LTBP4-224ENST00000599016 TSG101Q99816 390 aa24■■□□□ 1.43
LTBP4-224ENST00000599016 CCDC113Q9H0I3 377 aa24■■□□□ 1.43
LTBP4-224ENST00000599016 FZD8Q9H461 694 aa24■■□□□ 1.43
LTBP4-224ENST00000599016 CTNND2Q9UQB3 1225 aa24■■□□□ 1.43
LTBP4-224ENST00000599016 LAMA3Q16787 3333 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 BICDL2A1A5D9 508 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 PITPNM1O00562 1244 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 CHRNA1P02708 482 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 CLTBP09497 229 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 CCNE1P24864 410 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 NCBP1Q09161 790 aaKnown RBP23.99■■□□□ 1.43
LTBP4-224ENST00000599016 FAM187BQ17R55 369 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 C11orf57Q6ZUT1 292 aaPredicted RBP23.99■■□□□ 1.43
LTBP4-224ENST00000599016 TAS1R3Q7RTX0 852 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 P2RX5Q93086 422 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 PRIMPOLQ96LW4 560 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 GBP3Q9H0R5 595 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 MINDY3Q9H8M7 445 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 TMEM39AQ9NV64 488 aa23.99■■□□□ 1.43
LTBP4-224ENST00000599016 ACKR2O00590 384 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 CALUO43852 315 aaPredicted RBP23.98■■□□□ 1.43
LTBP4-224ENST00000599016 ERLIN2O94905 339 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 SELPP16109 830 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 KCNA1Q09470 495 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 TMEM132AQ24JP5 1023 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 PPP4R3CPQ6ZMV5 832 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 HS2ST1Q7LGA3 356 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 CATSPER4Q7RTX7 472 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 GOLGA5Q8TBA6 731 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 HTATIP2Q9BUP3 242 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 MRPL4Q9BYD3 311 aaKnown RBP23.98■■□□□ 1.43
LTBP4-224ENST00000599016 TYW1Q9NV66 732 aaKnown RBP23.98■■□□□ 1.43
LTBP4-224ENST00000599016 CGNQ9P2M7 1197 aaKnown RBP23.98■■□□□ 1.43
LTBP4-224ENST00000599016 RWDD2AQ9UIY3 292 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 SQORQ9Y6N5 450 aa23.98■■□□□ 1.43
LTBP4-224ENST00000599016 PDXKO00764 312 aa23.97■■□□□ 1.43
LTBP4-224ENST00000599016 HOXD13P35453 343 aa23.97■■□□□ 1.43
LTBP4-224ENST00000599016 LIG4P49917 911 aa23.97■■□□□ 1.43
LTBP4-224ENST00000599016 SNRPFP62306 86 aaKnown RBP23.97■■□□□ 1.43
LTBP4-224ENST00000599016 PRPF4BQ13523 1007 aaKnown RBP23.97■■□□□ 1.43
LTBP4-224ENST00000599016 CENPPQ6IPU0 288 aa23.97■■□□□ 1.43
LTBP4-224ENST00000599016 LRRC8DQ7L1W4 858 aa23.97■■□□□ 1.43
LTBP4-224ENST00000599016 NOC4LQ9BVI4 516 aaKnown RBP23.97■■□□□ 1.43
LTBP4-224ENST00000599016 KCTD10Q9H3F6 313 aa23.97■■□□□ 1.43
LTBP4-224ENST00000599016 HIPK3Q9H422 1215 aa23.97■■□□□ 1.43
LTBP4-224ENST00000599016 HNRNPDLO14979 420 aaKnown RBP23.96■■□□□ 1.43
LTBP4-224ENST00000599016 CSDE1O75534 798 aaKnown RBP23.96■■□□□ 1.43
LTBP4-224ENST00000599016 RPS6KA5O75582 802 aa23.96■■□□□ 1.43
LTBP4-224ENST00000599016 ZNF165P49910 485 aa23.96■■□□□ 1.43
LTBP4-224ENST00000599016 LRRC63Q05C16 580 aa23.96■■□□□ 1.43
LTBP4-224ENST00000599016 ZPBP2Q6X784 338 aa23.96■■□□□ 1.43
LTBP4-224ENST00000599016 USP38Q8NB14 1042 aa23.96■■□□□ 1.43
LTBP4-224ENST00000599016 BPIFA3Q9BQP9 254 aa23.96■■□□□ 1.43
LTBP4-224ENST00000599016 SEMA6BQ9H3T3 888 aa23.96■■□□□ 1.43
LTBP4-224ENST00000599016 TBX21Q9UL17 535 aa23.96■■□□□ 1.43
LTBP4-224ENST00000599016 NR2E3Q9Y5X4 410 aa23.96■■□□□ 1.43
LTBP4-224ENST00000599016 TANC1Q9C0D5 1861 aa23.96■■□□□ 1.43
LTBP4-224ENST00000599016 ZMYM2Q9UBW7 1377 aa23.95■■□□□ 1.42
LTBP4-224ENST00000599016 ALPK3Q96L96 1907 aa23.95■■□□□ 1.42
LTBP4-224ENST00000599016 PARNO95453 639 aaKnown RBP23.95■■□□□ 1.42
LTBP4-224ENST00000599016 PIGRP01833 764 aa23.95■■□□□ 1.42
LTBP4-224ENST00000599016 AXLP30530 894 aa23.95■■□□□ 1.42
LTBP4-224ENST00000599016 STX17P56962 302 aa23.95■■□□□ 1.42
LTBP4-224ENST00000599016 TPD52L1Q16890 204 aaPredicted RBP23.95■■□□□ 1.42
LTBP4-224ENST00000599016 FBXO47Q5MNV8 452 aa23.95■■□□□ 1.42
LTBP4-224ENST00000599016 TMEM40Q8WWA1 233 aa23.95■■□□□ 1.42
LTBP4-224ENST00000599016 TARS2Q9BW92 718 aaKnown RBP23.95■■□□□ 1.42
LTBP4-224ENST00000599016 NOC2LQ9Y3T9 749 aaKnown RBP23.95■■□□□ 1.42
LTBP4-224ENST00000599016 A0A0C4DFX4 3053 aa23.95■■□□□ 1.42
LTBP4-224ENST00000599016 CNTNAP2Q9UHC6 1331 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 SMTNL1A8MU46 457 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 GPR182O15218 404 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 IQCF3P0C7M6 154 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 FGFR4P22455 802 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 AMHR2Q16671 573 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 SLFN12LQ6IEE8 588 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 FOXR2Q6PJQ5 311 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 TSHZ1Q6ZSZ6 1077 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 ACO2Q99798 780 aaKnown RBP23.94■■□□□ 1.42
LTBP4-224ENST00000599016 PPP1R12CQ9BZL4 782 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 TRAF3IP3Q9Y228 551 aa23.94■■□□□ 1.42
LTBP4-224ENST00000599016 TGFB1I1O43294 461 aa23.93■■□□□ 1.42
LTBP4-224ENST00000599016 TSPAN1O60635 241 aa23.93■■□□□ 1.42
LTBP4-224ENST00000599016 GHRP10912 638 aa23.93■■□□□ 1.42
LTBP4-224ENST00000599016 MATR3P43243 847 aaKnown RBP eCLIP23.93■■□□□ 1.42
LTBP4-224ENST00000599016 PAK2Q13177 524 aa23.93■■□□□ 1.42
LTBP4-224ENST00000599016 EDRF1Q3B7T1 1238 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms