RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 HYIQ5T013 277 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 RINT1Q6NUQ1 792 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 MTERF4Q7Z6M4 381 aaKnown RBP13.34□□□□□ -0.27
ZNF548-209ENST00000598895 HELQQ8TDG4 1101 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 LRRC15Q8TF66 581 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 EPSTI1Q96J88 318 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 ZNF396Q96N95 335 aaPredicted RBP13.34□□□□□ -0.27
ZNF548-209ENST00000598895 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 ELAC1Q9H777 363 aaKnown RBP13.34□□□□□ -0.27
ZNF548-209ENST00000598895 CHST12Q9NRB3 414 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 FAM105AQ9NUU6 356 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 RNF19AQ9NV58 838 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 USP20Q9Y2K6 914 aa13.34□□□□□ -0.27
ZNF548-209ENST00000598895 CHD9Q3L8U1 2897 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 A0A0U1RQF3 1178 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 SFI1A8K8P3 1242 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
ZNF548-209ENST00000598895 LPXNO60711 386 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 TPM3P06753 285 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 LINC00271P0C7V0 271 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 PLA2G4BP0C869 781 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 PLCG1P19174 1290 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 HOXA11P31270 313 aaPredicted RBP13.33□□□□□ -0.28
ZNF548-209ENST00000598895 GPM6BQ13491 265 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 SLC39A14Q15043 492 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 TMEM132AQ24JP5 1023 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 CLLU1OSQ5K130 101 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 UBXN11Q5T124 520 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 ZBTB8OSQ8IWT0 167 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 ABI1Q8IZP0 508 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 DEPTORQ8TB45 409 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 SYMPKQ92797 1274 aaKnown RBP13.33□□□□□ -0.28
ZNF548-209ENST00000598895 IFT74Q96LB3 600 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 EIF2AQ9BY44 585 aaKnown RBP13.33□□□□□ -0.28
ZNF548-209ENST00000598895 PDCL3Q9H2J4 239 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
ZNF548-209ENST00000598895 SRPRBQ9Y5M8 271 aaKnown RBP13.33□□□□□ -0.28
ZNF548-209ENST00000598895 MTCH2Q9Y6C9 303 aa13.33□□□□□ -0.28
ZNF548-209ENST00000598895 TTLL13PA6NNM8 815 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 CCDC169A6NNP5 214 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 ARF4P18085 180 aaPredicted RBP13.32□□□□□ -0.28
ZNF548-209ENST00000598895 BMPR1AP36894 532 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 NAMPTP43490 491 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 SLC12A3P55017 1021 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 PEX3P56589 373 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 POU5F1BQ06416 359 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 MCM6Q14566 821 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 AMHR2Q16671 573 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 C1orf186Q6ZWK4 172 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 ZNF598Q86UK7 904 aaKnown RBP13.32□□□□□ -0.28
ZNF548-209ENST00000598895 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
ZNF548-209ENST00000598895 DAW1Q8N136 415 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
ZNF548-209ENST00000598895 KIFAP3Q92845 792 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 CHAMP1Q96JM3 812 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 SAMD11Q96NU1 681 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 CASD1Q96PB1 797 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 APOL6Q9BWW8 343 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 ALG13Q9NP73 1137 aaKnown RBP13.32□□□□□ -0.28
ZNF548-209ENST00000598895 PRDM6Q9NQX0 595 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 TYW1Q9NV66 732 aaKnown RBP13.32□□□□□ -0.28
ZNF548-209ENST00000598895 INPP5FQ9Y2H2 1132 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 PCDHB2Q9Y5E7 798 aa13.32□□□□□ -0.28
ZNF548-209ENST00000598895 PLXNA4Q9HCM2 1894 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 MYH11P35749 1972 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 H3BNC9 293 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 SPTLC2O15270 562 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 NPTXRO95502 500 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 EDN1P05305 212 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 PRKCBP05771 671 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 PBX3P40426 434 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 RAB27AP51159 221 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 NCBP1Q09161 790 aaKnown RBP13.31□□□□□ -0.28
ZNF548-209ENST00000598895 MAPK7Q13164 816 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 PPP2R5AQ15172 486 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 CDCA2Q69YH5 1023 aaPredicted RBP13.31□□□□□ -0.28
ZNF548-209ENST00000598895 NOTUMQ6P988 496 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 SASS6Q6UVJ0 657 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 LRRC55Q6ZSA7 311 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 FAM43BQ6ZT52 329 aaPredicted RBP13.31□□□□□ -0.28
ZNF548-209ENST00000598895 GPBP1Q86WP2 473 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 KRI1Q8N9T8 703 aaKnown RBP13.31□□□□□ -0.28
ZNF548-209ENST00000598895 LINC00301Q8NCQ3 95 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 RAD54LQ92698 747 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 NFKBIZQ9BYH8 718 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 TMEM117Q9H0C3 514 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 C2orf40Q9H1Z8 148 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 BLOC1S4Q9NUP1 217 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 HES2Q9Y543 173 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 ATG2AQ2TAZ0 1938 aa13.31□□□□□ -0.28
ZNF548-209ENST00000598895 GRM6O15303 877 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 HOXA2O43364 376 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 EOMESO95936 686 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 KRT18P05783 430 aaKnown RBP13.3□□□□□ -0.28
ZNF548-209ENST00000598895 SKIP12755 728 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 TXLNAP40222 546 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 NPTX2P47972 431 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 DNM1Q05193 864 aaKnown RBP13.3□□□□□ -0.28
ZNF548-209ENST00000598895 PRPF4BQ13523 1007 aaKnown RBP13.3□□□□□ -0.28
ZNF548-209ENST00000598895 SKIV2LQ15477 1246 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms