RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 PGBD4Q96DM1 585 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 CCDC51Q96ER9 411 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 CLIC6Q96NY7 704 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 BLOC1S4Q9NUP1 217 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 PRMT7Q9NVM4 692 aaPredicted RBP18.49■□□□□ 0.55
SSBP4-204ENST00000597724 KCND2Q9NZV8 630 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 TFIP11Q9UBB9 837 aaKnown RBP18.49■□□□□ 0.55
SSBP4-204ENST00000597724 HCSTQ9UBK5 93 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 MYH15Q9Y2K3 1946 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 MEIS3P2A8K0S8 358 aa18.48■□□□□ 0.55
SSBP4-204ENST00000597724 PLCG1P19174 1290 aa18.48■□□□□ 0.55
SSBP4-204ENST00000597724 RSPH1Q8WYR4 309 aa18.48■□□□□ 0.55
SSBP4-204ENST00000597724 SYMPKQ92797 1274 aaKnown RBP18.48■□□□□ 0.55
SSBP4-204ENST00000597724 MRPL38Q96DV4 380 aaKnown RBP18.48■□□□□ 0.55
SSBP4-204ENST00000597724 DRC1Q96MC2 740 aa18.48■□□□□ 0.55
SSBP4-204ENST00000597724 CCDC113Q9H0I3 377 aa18.48■□□□□ 0.55
SSBP4-204ENST00000597724 A0A1B0GUA9 196 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 NPTX2P47972 431 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 EFNA5P52803 228 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 RAD51AP2Q09MP3 1159 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 STK38Q15208 465 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 ARSHQ5FYA8 562 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 SPOUT1Q5T280 376 aaKnown RBP18.47■□□□□ 0.55
SSBP4-204ENST00000597724 AGMOQ6ZNB7 445 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 LRRC43Q8N309 656 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 KRI1Q8N9T8 703 aaKnown RBP18.47■□□□□ 0.55
SSBP4-204ENST00000597724 KLHL23Q8NBE8 558 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 SMG8Q8ND04 991 aaKnown RBP18.47■□□□□ 0.55
SSBP4-204ENST00000597724 CNNM3Q8NE01 707 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 RASSF8Q8NHQ8 419 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 EIF2AQ9BY44 585 aaKnown RBP18.47■□□□□ 0.55
SSBP4-204ENST00000597724 LMAN2LQ9H0V9 348 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 C17orf75Q9HAS0 396 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 AAASQ9NRG9 546 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 PLAGL2Q9UPG8 496 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 PCDHB12Q9Y5F1 795 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 CNTNAP2Q9UHC6 1331 aa18.47■□□□□ 0.55
SSBP4-204ENST00000597724 TTLL13PA6NNM8 815 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 SFI1A8K8P3 1242 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 ACKR2O00590 384 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 SPTLC2O15270 562 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 GRM6O15303 877 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 OFD1O75665 1012 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 ITGB1P05556 798 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 PRKCBP05771 671 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 NCLP19338 710 aaKnown RBP18.46■□□□□ 0.55
SSBP4-204ENST00000597724 PEX3P56589 373 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 MAPK6Q16659 721 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 PTPROQ16827 1216 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 SLC27A1Q6PCB7 646 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 GLB1LQ6UWU2 654 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 CDR2LQ86X02 465 aaPredicted RBP18.46■□□□□ 0.55
SSBP4-204ENST00000597724 COLGALT1Q8NBJ5 622 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 SLC17A8Q8NDX2 589 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 RAD54LQ92698 747 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 NTPCRQ9BSD7 190 aaKnown RBP18.46■□□□□ 0.55
SSBP4-204ENST00000597724 KIFC3Q9BVG8 833 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 MRPL9Q9BYD2 267 aaKnown RBP18.46■□□□□ 0.55
SSBP4-204ENST00000597724 ALG13Q9NP73 1137 aaKnown RBP18.46■□□□□ 0.55
SSBP4-204ENST00000597724 CCDC39Q9UFE4 941 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 IPPQ9Y573 584 aa18.46■□□□□ 0.55
SSBP4-204ENST00000597724 CCDC169A6NNP5 214 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 K7ERI5 159 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 PPP6R2O75170 966 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 YEATS4O95619 227 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 EDN1P05305 212 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 LAG3P18627 525 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 DDIT3P35638 169 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 DMP1Q13316 513 aaPredicted RBP18.45■□□□□ 0.54
SSBP4-204ENST00000597724 PRPF4BQ13523 1007 aaKnown RBP18.45■□□□□ 0.54
SSBP4-204ENST00000597724 DHX8Q14562 1220 aaKnown RBP18.45■□□□□ 0.54
SSBP4-204ENST00000597724 MCM6Q14566 821 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 FOXD4L6Q3SYB3 417 aaPredicted RBP18.45■□□□□ 0.54
SSBP4-204ENST00000597724 NOMO2Q5JPE7 1267 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 ATL3Q6DD88 541 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 FOXD4L3Q6VB84 417 aaPredicted RBP18.45■□□□□ 0.54
SSBP4-204ENST00000597724 GPBP1Q86WP2 473 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 SPPL3Q8TCT6 385 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 LARP4BQ92615 738 aaKnown RBP18.45■□□□□ 0.54
SSBP4-204ENST00000597724 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 RSAD1Q9HA92 442 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 UBN1Q9NPG3 1134 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 ARHGAP28Q9P2N2 729 aa18.45■□□□□ 0.54
SSBP4-204ENST00000597724 RBM19Q9Y4C8 960 aaKnown RBP18.45■□□□□ 0.54
SSBP4-204ENST00000597724 NPHP3-ACAD11A0A0J9YXS1 232 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 BRD1O95696 1058 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 ITGA4P13612 1032 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 PLS3P13797 630 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 TXLNAP40222 546 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 CAMK1Q14012 370 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 BECN1Q14457 450 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 CSPP1Q1MSJ5 1256 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 KCNT2Q6UVM3 1135 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 SPIRE2Q8WWL2 714 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 TRIM6Q9C030 488 aaPredicted RBP18.44■□□□□ 0.54
SSBP4-204ENST00000597724 PDZD7Q9H5P4 517 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 TMEM134Q9H6X4 195 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 KMT5AQ9NQR1 393 aa18.44■□□□□ 0.54
SSBP4-204ENST00000597724 PRDM6Q9NQX0 595 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms