RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 MRPL43Q8N983 215 aaKnown RBP19.94■□□□□ 0.78
HOMER3-208ENST00000595756 RNF149Q8NC42 400 aa19.94■□□□□ 0.78
HOMER3-208ENST00000595756 HSD17B14Q9BPX1 270 aa19.94■□□□□ 0.78
HOMER3-208ENST00000595756 TTC12Q9H892 705 aaPredicted RBP19.94■□□□□ 0.78
HOMER3-208ENST00000595756 XPNPEP1Q9NQW7 623 aa19.94■□□□□ 0.78
HOMER3-208ENST00000595756 INPP5FQ9Y2H2 1132 aa19.94■□□□□ 0.78
HOMER3-208ENST00000595756 ZNF318Q5VUA4 2279 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 NT5C1B-RDH14C9J2C7 533 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 K7ELQ4 463 aaPredicted RBP19.93■□□□□ 0.78
HOMER3-208ENST00000595756 WNT7AO00755 349 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 DGAT1O75907 488 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 HOXA11P31270 313 aaPredicted RBP19.93■□□□□ 0.78
HOMER3-208ENST00000595756 LLGL2Q6P1M3 1020 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 SYCE2Q6PIF2 218 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 IFNLR1Q8IU57 520 aaPredicted RBP19.93■□□□□ 0.78
HOMER3-208ENST00000595756 HSCBQ8IWL3 235 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 URGCPQ8TCY9 931 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 CCDC51Q96ER9 411 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 IGSF21Q96ID5 467 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 C8orf76Q96K31 380 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 MTMR9Q96QG7 549 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 S1PR5Q9H228 398 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 NRDE2Q9H7Z3 1164 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 RSAD1Q9HA92 442 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 ANKEF1Q9NU02 776 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 STK39Q9UEW8 545 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 HCFC2Q9Y5Z7 792 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 IRAK3Q9Y616 596 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 TECTAO75443 2155 aa19.93■□□□□ 0.78
HOMER3-208ENST00000595756 ZBTB39O15060 712 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 ERLIN2O94905 339 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 AXLP30530 894 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 FOSBP53539 338 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 PTENP60484 403 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 RNASELQ05823 741 aaKnown RBP19.92■□□□□ 0.78
HOMER3-208ENST00000595756 POU5F1BQ06416 359 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 CUL4AQ13619 759 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 GIT2Q14161 759 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 SAFBQ15424 915 aaKnown RBP eCLIP19.92■□□□□ 0.78
HOMER3-208ENST00000595756 LONRF3Q496Y0 759 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 UBXN11Q5T124 520 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 AGMOQ6ZNB7 445 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 DDX53Q86TM3 631 aaKnown RBP19.92■□□□□ 0.78
HOMER3-208ENST00000595756 VPS52Q8N1B4 723 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 CNNM3Q8NE01 707 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 CCDC43Q96MW1 224 aaKnown RBP19.92■□□□□ 0.78
HOMER3-208ENST00000595756 SMC3Q9UQE7 1217 aa19.92■□□□□ 0.78
HOMER3-208ENST00000595756 TDRD15B5MCY1 1934 aaKnown RBP19.92■□□□□ 0.78
HOMER3-208ENST00000595756 DENND4AQ7Z401 1863 aa19.91■□□□□ 0.78
HOMER3-208ENST00000595756 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.91■□□□□ 0.78
HOMER3-208ENST00000595756 GALTP07902 379 aa19.91■□□□□ 0.78
HOMER3-208ENST00000595756 CTSAP10619 480 aa19.91■□□□□ 0.78
HOMER3-208ENST00000595756 NCLP19338 710 aaKnown RBP19.91■□□□□ 0.78
HOMER3-208ENST00000595756 TXKP42681 527 aa19.91■□□□□ 0.78
HOMER3-208ENST00000595756 RARRES1P49788 294 aa19.91■□□□□ 0.78
HOMER3-208ENST00000595756 TFDP1Q14186 410 aa19.91■□□□□ 0.78
HOMER3-208ENST00000595756 TPRNQ4KMQ1 711 aa19.91■□□□□ 0.78
HOMER3-208ENST00000595756 INTS4Q96HW7 963 aaKnown RBP19.91■□□□□ 0.78
HOMER3-208ENST00000595756 NFKBIZQ9BYH8 718 aa19.91■□□□□ 0.78
HOMER3-208ENST00000595756 KANSL3Q9P2N6 904 aa19.91■□□□□ 0.78
HOMER3-208ENST00000595756 DNAJB4Q9UDY4 337 aa19.91■□□□□ 0.78
HOMER3-208ENST00000595756 POTEMA6NI47 508 aa19.9■□□□□ 0.78
HOMER3-208ENST00000595756 TSPAN1O60635 241 aa19.9■□□□□ 0.78
HOMER3-208ENST00000595756 CLASP2O75122 1294 aaKnown RBP19.9■□□□□ 0.78
HOMER3-208ENST00000595756 SLC11A1P49279 550 aa19.9■□□□□ 0.78
HOMER3-208ENST00000595756 ORC2Q13416 577 aaPredicted RBP19.9■□□□□ 0.78
HOMER3-208ENST00000595756 CAPSQ13938 189 aa19.9■□□□□ 0.78
HOMER3-208ENST00000595756 NOTUMQ6P988 496 aa19.9■□□□□ 0.78
HOMER3-208ENST00000595756 BCL7CQ8WUZ0 217 aaPredicted RBP19.9■□□□□ 0.78
HOMER3-208ENST00000595756 EDAQ92838 391 aa19.9■□□□□ 0.78
HOMER3-208ENST00000595756 TMEM175Q9BSA9 504 aa19.9■□□□□ 0.78
HOMER3-208ENST00000595756 UBN1Q9NPG3 1134 aa19.9■□□□□ 0.78
HOMER3-208ENST00000595756 INPPL1O15357 1258 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 B4GALT3O60512 393 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 CA8P35219 290 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 ARL2P36404 184 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 MBTD1Q05BQ5 628 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 ITIH3Q06033 890 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 HFE2Q6ZVN8 426 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 ZNF280BQ86YH2 543 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 SMG8Q8ND04 991 aaKnown RBP19.89■□□□□ 0.77
HOMER3-208ENST00000595756 FBXO18Q8NFZ0 1043 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 ASAP3Q8TDY4 903 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 RPGRIP1Q96KN7 1286 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 NECTIN4Q96NY8 510 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 GBP3Q9H0R5 595 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 KCNH6Q9H252 994 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 TMEM60Q9H2L4 133 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 DZANK1Q9NVP4 752 aa19.89■□□□□ 0.77
HOMER3-208ENST00000595756 ZMYM2Q9UBW7 1377 aa19.88■□□□□ 0.77
HOMER3-208ENST00000595756 INO80B-WBP1J3KQ70 363 aa19.88■□□□□ 0.77
HOMER3-208ENST00000595756 CXCL14O95715 111 aa19.88■□□□□ 0.77
HOMER3-208ENST00000595756 XRCC6P12956 609 aaKnown RBP eCLIP19.88■□□□□ 0.77
HOMER3-208ENST00000595756 GJB2P29033 226 aa19.88■□□□□ 0.77
HOMER3-208ENST00000595756 AMHR2Q16671 573 aa19.88■□□□□ 0.77
HOMER3-208ENST00000595756 VN1R3Q9BXE9 311 aa19.88■□□□□ 0.77
HOMER3-208ENST00000595756 ADAM7Q9H2U9 754 aa19.88■□□□□ 0.77
HOMER3-208ENST00000595756 TUFT1Q9NNX1 390 aa19.88■□□□□ 0.77
HOMER3-208ENST00000595756 IPPQ9Y573 584 aa19.88■□□□□ 0.77
HOMER3-208ENST00000595756 DDHD2O94830 711 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms