RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ZBTB8OSQ8IWT0 167 aa22.73■■□□□ 1.23
PNKP-203ENST00000593946 SLC35C1Q96A29 364 aa22.73■■□□□ 1.23
PNKP-203ENST00000593946 NLRP4Q96MN2 994 aa22.73■■□□□ 1.23
PNKP-203ENST00000593946 NFKBIZQ9BYH8 718 aa22.73■■□□□ 1.23
PNKP-203ENST00000593946 ZKSCAN5Q9Y2L8 839 aa22.73■■□□□ 1.23
PNKP-203ENST00000593946 STYXL1Q9Y6J8 313 aa22.73■■□□□ 1.23
PNKP-203ENST00000593946 MSCO60682 206 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 GYPCP04921 128 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 EDN1P05305 212 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 SFPQP23246 707 aaKnown RBP eCLIP22.72■■□□□ 1.23
PNKP-203ENST00000593946 LIG4P49917 911 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 PTENP60484 403 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 ADAM17P78536 824 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 KCNH2Q12809 1159 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 LRMPQ12912 555 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 TRIM14Q14142 442 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 NFRKBQ6P4R8 1299 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 XPNPEP3Q9NQH7 507 aa22.72■■□□□ 1.23
PNKP-203ENST00000593946 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.72■■□□□ 1.23
PNKP-203ENST00000593946 HOXC8P31273 242 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 CHMP4BP1P59074 171 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 KIAA0319LQ8IZA0 1049 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 SLAIN1Q8ND83 568 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 ZSWIM2Q8NEG5 633 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 AKT3Q9Y243 479 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 SIK3Q9Y2K2 1263 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 CEP350Q5VT06 3117 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 HSPA6P17066 643 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 RBL2Q08999 1139 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 ZSCAN30Q86W11 494 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 PPFIBP1Q86W92 1011 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 IFNLR1Q8IU57 520 aaPredicted RBP22.71■■□□□ 1.23
PNKP-203ENST00000593946 TC2NQ8N9U0 490 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 POMGNT1Q8WZA1 660 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 FBXL18Q96ME1 805 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 MAP7D2Q96T17 732 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 MTG1Q9BT17 334 aaPredicted RBP22.71■■□□□ 1.23
PNKP-203ENST00000593946 IFT122Q9HBG6 1241 aa22.71■■□□□ 1.23
PNKP-203ENST00000593946 ZEB2O60315 1214 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 AFPP02771 609 aaKnown RBP22.7■■□□□ 1.22
PNKP-203ENST00000593946 VTNP04004 478 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 CST5P28325 142 aaPredicted RBP22.7■■□□□ 1.22
PNKP-203ENST00000593946 BFSP1Q12934 665 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 HIC1Q14526 733 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 MAPK6Q16659 721 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 DCAF17Q5H9S7 520 aaPredicted RBP22.7■■□□□ 1.22
PNKP-203ENST00000593946 ZPBP2Q6X784 338 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 INTS8Q75QN2 995 aaKnown RBP22.7■■□□□ 1.22
PNKP-203ENST00000593946 CCDC155Q8N6L0 562 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 KLHDC9Q8NEP7 349 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 PPP1R13LQ8WUF5 828 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 TARS2Q9BW92 718 aaKnown RBP22.7■■□□□ 1.22
PNKP-203ENST00000593946 TSKSQ9UJT2 592 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 USP20Q9Y2K6 914 aa22.7■■□□□ 1.22
PNKP-203ENST00000593946 PRKCBP05771 671 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 PHKA2P46019 1235 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 KLK7P49862 253 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 MCCD1P59942 119 aaPredicted RBP22.69■■□□□ 1.22
PNKP-203ENST00000593946 GOLGA8FQ08AF8 430 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 GOLGA8DPQ0D2H9 430 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 TCERG1LQ5VWI1 586 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 RDH13Q8NBN7 331 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 ZNF668Q96K58 619 aaPredicted RBP22.69■■□□□ 1.22
PNKP-203ENST00000593946 BEGAINQ9BUH8 593 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 MRPL4Q9BYD3 311 aaKnown RBP22.69■■□□□ 1.22
PNKP-203ENST00000593946 TTYH3Q9C0H2 523 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 FZD8Q9H461 694 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 DDX20Q9UHI6 824 aaKnown RBP22.69■■□□□ 1.22
PNKP-203ENST00000593946 DNAH12Q6ZR08 3092 aa22.69■■□□□ 1.22
PNKP-203ENST00000593946 SMIM35A0A1B0GVV1 85 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 AKR1B15C9JRZ8 316 aaPredicted RBP22.68■■□□□ 1.22
PNKP-203ENST00000593946 KIAA0391O15091 583 aaKnown RBP22.68■■□□□ 1.22
PNKP-203ENST00000593946 INHAP05111 366 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 CASP14P31944 242 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 FXR1P51114 621 aaKnown RBP eCLIP22.68■■□□□ 1.22
PNKP-203ENST00000593946 CCZ1BP86790 482 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 CCZ1P86791 482 aaPredicted RBP22.68■■□□□ 1.22
PNKP-203ENST00000593946 MBTD1Q05BQ5 628 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 SNRNP35Q16560 246 aaKnown RBP22.68■■□□□ 1.22
PNKP-203ENST00000593946 FIGNQ5HY92 759 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 SLFN12LQ6IEE8 588 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 CXCL17Q6UXB2 119 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 SAAL1Q96ER3 474 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 MINDY3Q9H8M7 445 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 A0A087WZ62 844 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 GOLGA8IPA6NC78 632 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 GOLGA8JA6NMD2 632 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 TTLL13PA6NNM8 815 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 MFAP3LO75121 409 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 ADRB2P07550 413 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 TPM1P09493 284 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 GPC3P51654 580 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 ADKP55263 362 aaKnown RBP22.68■■□□□ 1.22
PNKP-203ENST00000593946 KCNMA1Q12791 1236 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 CCSAPQ6IQ19 270 aaPredicted RBP22.68■■□□□ 1.22
PNKP-203ENST00000593946 GPD1LQ8N335 351 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 FDXACB1Q9BRP7 624 aaPredicted RBP22.68■■□□□ 1.22
PNKP-203ENST00000593946 NUP58Q9BVL2 599 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 HAPLN2Q9GZV7 340 aa22.68■■□□□ 1.22
PNKP-203ENST00000593946 HDAC6Q9UBN7 1215 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms