RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 RHPN2Q8IUC4 686 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 SLC9A9Q8IVB4 645 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 REXO1L1PQ8IX06 675 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 RAET1EQ8TD07 263 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 KCNN1Q92952 543 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 MAP7D2Q96T17 732 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 CBWD1Q9BRT8 395 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 PDCL3Q9H2J4 239 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 NDST4Q9H3R1 872 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 CGNQ9P2M7 1197 aaKnown RBP14.45□□□□□ -0.1
VRK3-205ENST00000593919 SUCLA2Q9P2R7 463 aaPredicted RBP14.45□□□□□ -0.1
VRK3-205ENST00000593919 PPP2R2CQ9Y2T4 447 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 ANKRD63C9JTQ0 380 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 HNRNPDLO14979 420 aaKnown RBP14.44□□□□□ -0.1
VRK3-205ENST00000593919 MAGEB2O15479 319 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 PGK1P00558 417 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 MYL3P08590 195 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 RARBP10826 455 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 GJA9P57773 515 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 MFSD10Q14728 455 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 MARCH8Q5T0T0 291 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 SLC39A4Q6P5W5 647 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 MTHFD1LQ6UB35 978 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 FRMD5Q7Z6J6 570 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 C12orf56Q8IXR9 622 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 LINC01465Q8N7H1 131 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 RNF149Q8NC42 400 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 PPP1R13LQ8WUF5 828 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 TMEM174Q8WUU8 243 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 PCIF1Q9H4Z3 704 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 ARMCX3Q9UH62 379 aaPredicted RBP14.44□□□□□ -0.1
VRK3-205ENST00000593919 TSKSQ9UJT2 592 aa14.44□□□□□ -0.1
VRK3-205ENST00000593919 SRGAP2CP0DJJ0 459 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 SMIM10L2AP0DMW4 78 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 SMIM10L2BP0DMW5 78 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 SCP2P22307 547 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 ADSSP30520 456 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 SNRPFP62306 86 aaKnown RBP14.43□□□□□ -0.1
VRK3-205ENST00000593919 PURAQ00577 322 aaKnown RBP14.43□□□□□ -0.1
VRK3-205ENST00000593919 STRN3Q13033 797 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 MYBPC2Q14324 1141 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 NAA30Q147X3 362 aaPredicted RBP14.43□□□□□ -0.1
VRK3-205ENST00000593919 CDCA2Q69YH5 1023 aaPredicted RBP14.43□□□□□ -0.1
VRK3-205ENST00000593919 LMBR1Q8WVP7 490 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 BICD1Q96G01 975 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 PANX2Q96RD6 677 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 MKNK1Q9BUB5 465 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 SETD4Q9NVD3 440 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 HSPBP1Q9NZL4 362 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.43□□□□□ -0.1
VRK3-205ENST00000593919 ITIH6Q6UXX5 1313 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 PHLPP2Q6ZVD8 1323 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 K7ERI5 159 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 HAS3O00219 553 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 EXOC3O60645 756 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 MFAP3LO75121 409 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 CASP14P31944 242 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 PSMC2P35998 433 aaKnown RBP14.43□□□□□ -0.1
VRK3-205ENST00000593919 PSEN2P49810 448 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 NCBP1Q09161 790 aaKnown RBP14.43□□□□□ -0.1
VRK3-205ENST00000593919 MTF1Q14872 753 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 GNASQ5JWF2 1037 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 MAP3K21Q5TCX8 1036 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 MTERF4Q7Z6M4 381 aaKnown RBP14.43□□□□□ -0.1
VRK3-205ENST00000593919 FAM186BQ8IYM0 893 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 BORCS6Q96GS4 357 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 ZNF668Q96K58 619 aaPredicted RBP14.43□□□□□ -0.1
VRK3-205ENST00000593919 NLRP4Q96MN2 994 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 DESI2Q9BSY9 194 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 UPF3AQ9H1J1 476 aaKnown RBP14.43□□□□□ -0.1
VRK3-205ENST00000593919 TMEM134Q9H6X4 195 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 METTL14Q9HCE5 456 aaKnown RBP14.43□□□□□ -0.1
VRK3-205ENST00000593919 DNAI1Q9UI46 699 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 USP20Q9Y2K6 914 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 FRMD4BQ9Y2L6 1034 aa14.43□□□□□ -0.1
VRK3-205ENST00000593919 NRCAMQ92823 1304 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 FRMPD3Q5JV73 1810 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 A0A1W2PQC6 194 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 SOWAHDA6NJG2 315 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 GYPCP04921 128 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 EDN1P05305 212 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 TPM1P09493 284 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 FKBP15Q5T1M5 1219 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 ZSWIM2Q8NEG5 633 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 PXYLP1Q8TE99 480 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 ERGIC2Q96RQ1 377 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 KATNAL1Q9BW62 490 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 SPC25Q9HBM1 224 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 RRN3P2A6NIE6 340 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 ASAP2O43150 1006 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 VTNP04004 478 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 TMOD1P28289 359 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 FXR1P51114 621 aaKnown RBP eCLIP14.42□□□□□ -0.1
VRK3-205ENST00000593919 EFNA5P52803 228 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 ETF1P62495 437 aaKnown RBP14.42□□□□□ -0.1
VRK3-205ENST00000593919 SYCP1Q15431 976 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 DCAF17Q5H9S7 520 aaPredicted RBP14.42□□□□□ -0.1
VRK3-205ENST00000593919 NFRKBQ6P4R8 1299 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 TRIM65Q6PJ69 517 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 CCDC155Q8N6L0 562 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms