RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 GBP3Q9H0R5 595 aa13.53□□□□□ -0.24
ZNF558-202ENST00000593891 BRD9Q9H8M2 597 aa13.53□□□□□ -0.24
ZNF558-202ENST00000593891 JADE2Q9NQC1 790 aa13.53□□□□□ -0.24
ZNF558-202ENST00000593891 MYO9AB2RTY4 2548 aa13.52□□□□□ -0.24
ZNF558-202ENST00000593891 M0R2C6 588 aa13.52□□□□□ -0.25
ZNF558-202ENST00000593891 ZMYND10O75800 440 aa13.52□□□□□ -0.25
ZNF558-202ENST00000593891 SOD2P04179 222 aa13.52□□□□□ -0.25
ZNF558-202ENST00000593891 ZFYP08048 801 aaPredicted RBP13.52□□□□□ -0.25
ZNF558-202ENST00000593891 GLB1LQ6UWU2 654 aa13.52□□□□□ -0.25
ZNF558-202ENST00000593891 MDM1Q8TC05 714 aa13.52□□□□□ -0.25
ZNF558-202ENST00000593891 PPP1R16BQ96T49 567 aa13.52□□□□□ -0.25
ZNF558-202ENST00000593891 RXFP1Q9HBX9 757 aa13.52□□□□□ -0.25
ZNF558-202ENST00000593891 TBC1D13Q9NVG8 400 aa13.52□□□□□ -0.25
ZNF558-202ENST00000593891 ACACAQ13085 2346 aa13.52□□□□□ -0.25
ZNF558-202ENST00000593891 ANKRD17O75179 2603 aaKnown RBP13.51□□□□□ -0.25
ZNF558-202ENST00000593891 TICRRQ7Z2Z1 1910 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 MYH15Q9Y2K3 1946 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 CCDC163A0A0D9SF12 145 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 CDX4O14627 284 aaPredicted RBP13.51□□□□□ -0.25
ZNF558-202ENST00000593891 TGM5O43548 720 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 RHOBTB1O94844 696 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 ALDH2P05091 517 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 NTHL1P78549 312 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 ELF2Q15723 593 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 ZNF423Q2M1K9 1284 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 NOMO2Q5JPE7 1267 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 RAB44Q7Z6P3 723 aaPredicted RBP13.51□□□□□ -0.25
ZNF558-202ENST00000593891 IRF7Q92985 503 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 JMJD4Q9H9V9 463 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 DNAJB4Q9UDY4 337 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 PIAS3Q9Y6X2 628 aa13.51□□□□□ -0.25
ZNF558-202ENST00000593891 TEX15Q9BXT5 2789 aa13.5□□□□□ -0.25
ZNF558-202ENST00000593891 GLUD2P49448 558 aa13.5□□□□□ -0.25
ZNF558-202ENST00000593891 ITFG1Q8TB96 612 aa13.5□□□□□ -0.25
ZNF558-202ENST00000593891 CDHR1Q96JP9 859 aa13.5□□□□□ -0.25
ZNF558-202ENST00000593891 HERC2P3Q9BVR0 1158 aa13.5□□□□□ -0.25
ZNF558-202ENST00000593891 PLA2G2FQ9BZM2 168 aa13.5□□□□□ -0.25
ZNF558-202ENST00000593891 INPP5FQ9Y2H2 1132 aa13.5□□□□□ -0.25
ZNF558-202ENST00000593891 FAN1Q9Y2M0 1017 aa13.5□□□□□ -0.25
ZNF558-202ENST00000593891 F5P12259 2224 aa13.49□□□□□ -0.25
ZNF558-202ENST00000593891 APC2O95996 2303 aa13.49□□□□□ -0.25
ZNF558-202ENST00000593891 BCLAF3A2AJT9 711 aaKnown RBP13.49□□□□□ -0.25
ZNF558-202ENST00000593891 KRT38O76015 456 aa13.49□□□□□ -0.25
ZNF558-202ENST00000593891 HNRNPA1P09651 372 aaKnown RBP eCLIP13.49□□□□□ -0.25
ZNF558-202ENST00000593891 PLK5Q496M5 336 aa13.49□□□□□ -0.25
ZNF558-202ENST00000593891 DGKKQ5KSL6 1271 aa13.49□□□□□ -0.25
ZNF558-202ENST00000593891 PLPPR4Q7Z2D5 763 aa13.49□□□□□ -0.25
ZNF558-202ENST00000593891 ZNF280BQ86YH2 543 aa13.49□□□□□ -0.25
ZNF558-202ENST00000593891 KBTBD3Q8NAB2 608 aa13.49□□□□□ -0.25
ZNF558-202ENST00000593891 CRELD1Q96HD1 420 aa13.49□□□□□ -0.25
ZNF558-202ENST00000593891 POLIQ9UNA4 740 aa13.49□□□□□ -0.25
ZNF558-202ENST00000593891 ATP9AO75110 1047 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 XYLBO75191 536 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 CCNE1P24864 410 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 STAT5BP51692 787 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 CFHR1Q03591 330 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 TRAF1Q13077 416 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 ASPRV1Q53RT3 343 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 PDXDC2PQ6P474 469 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 C1orf228Q6PIY5 440 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 CCNI2Q6ZMN8 369 aaPredicted RBP13.48□□□□□ -0.25
ZNF558-202ENST00000593891 NPAS3Q8IXF0 933 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 TMEM57Q8N5G2 664 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 SPATA18Q8TC71 538 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 FRAT1Q92837 279 aaPredicted RBP13.48□□□□□ -0.25
ZNF558-202ENST00000593891 ELSPBP1Q96BH3 223 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 FAM193BQ96PV7 902 aaPredicted RBP13.48□□□□□ -0.25
ZNF558-202ENST00000593891 PCYT2Q99447 389 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 TRMT61BQ9BVS5 477 aaKnown RBP13.48□□□□□ -0.25
ZNF558-202ENST00000593891 RBM12Q9NTZ6 932 aaKnown RBP13.48□□□□□ -0.25
ZNF558-202ENST00000593891 ANAPC4Q9UJX5 808 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 KCNH3Q9ULD8 1083 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 TNNQ9UQP3 1299 aa13.48□□□□□ -0.25
ZNF558-202ENST00000593891 A0A087WV48 116 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 TRIM6-TRIM34B2RNG4 842 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 GPR32O75388 356 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 FGRP09769 529 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 KCNA2P16389 499 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 PXNP49023 591 aaPredicted RBP13.47□□□□□ -0.25
ZNF558-202ENST00000593891 GRM2Q14416 872 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 TANGO2Q6ICL3 276 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 CEP85Q6P2H3 762 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 LILRA6Q6PI73 481 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 Q6ZS52 159 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 TAS1R1Q7RTX1 841 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 TMEM175Q9BSA9 504 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 DUSP15Q9H1R2 295 aaPredicted RBP13.47□□□□□ -0.25
ZNF558-202ENST00000593891 TRPV5Q9NQA5 729 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.47□□□□□ -0.25
ZNF558-202ENST00000593891 C2orf42Q9NWW7 574 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 GDE1Q9NZC3 331 aa13.47□□□□□ -0.25
ZNF558-202ENST00000593891 FRMPD4Q14CM0 1322 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 VTNP04004 478 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 SKIP12755 728 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 ABCG1P45844 678 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 PPM1LQ5SGD2 360 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 LIN9Q5TKA1 542 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 PCNX4Q63HM2 1172 aa13.46□□□□□ -0.25
ZNF558-202ENST00000593891 SCUBE3Q8IX30 993 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms