RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 MEIS3P2A8K0S8 358 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 HIP1RO75146 1068 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 SSBP05455 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
DDX39A-217ENST00000592391 ITGB1P05556 798 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 PLA2G4BP0C869 781 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 ZSCAN22P10073 491 aaPredicted RBP16.04■□□□□ 0.16
DDX39A-217ENST00000592391 NCLP19338 710 aaKnown RBP16.04■□□□□ 0.16
DDX39A-217ENST00000592391 NASPP49321 788 aaPredicted RBP16.04■□□□□ 0.16
DDX39A-217ENST00000592391 MAPK7Q13164 816 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 SLC39A14Q15043 492 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 SKIV2LQ15477 1246 aaKnown RBP16.04■□□□□ 0.16
DDX39A-217ENST00000592391 MAPK6Q16659 721 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 TIGD5Q53EQ6 642 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 AGMOQ6ZNB7 445 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 COLGALT1Q8NBJ5 622 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 SPRYD3Q8NCJ5 442 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 CNNM3Q8NE01 707 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 KIFC3Q9BVG8 833 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 EIF2AQ9BY44 585 aaKnown RBP16.04■□□□□ 0.16
DDX39A-217ENST00000592391 CCSER1Q9C0I3 900 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 CCDC113Q9H0I3 377 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 C17orf75Q9HAS0 396 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 ALG13Q9NP73 1137 aaKnown RBP16.04■□□□□ 0.16
DDX39A-217ENST00000592391 KCND2Q9NZV8 630 aa16.04■□□□□ 0.16
DDX39A-217ENST00000592391 KIAA1671Q9BY89 1806 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 CNTNAP2Q9UHC6 1331 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 A0A1B0GUA9 196 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 OFD1O75665 1012 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 PLCG1P19174 1290 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 NPTX2P47972 431 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 EFNA5P52803 228 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 PEX3P56589 373 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 KARSQ15046 597 aaKnown RBP16.03■□□□□ 0.16
DDX39A-217ENST00000592391 NOMO2Q5JPE7 1267 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 SLC27A1Q6PCB7 646 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 SMG8Q8ND04 991 aaKnown RBP16.03■□□□□ 0.16
DDX39A-217ENST00000592391 RASSF8Q8NHQ8 419 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 SPPL3Q8TCT6 385 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 LRRC15Q8TF66 581 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 ZNF396Q96N95 335 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-217ENST00000592391 THEGQ9P2T0 379 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 IPPQ9Y573 584 aa16.03■□□□□ 0.16
DDX39A-217ENST00000592391 ACKR2O00590 384 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 FGF18O76093 207 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 F13A1P00488 732 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 PRKCBP05771 671 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 DNAJB1P25685 340 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 UBE3AQ05086 875 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 DMP1Q13316 513 aaPredicted RBP16.02■□□□□ 0.16
DDX39A-217ENST00000592391 PRPF4BQ13523 1007 aaKnown RBP16.02■□□□□ 0.16
DDX39A-217ENST00000592391 CAMK1Q14012 370 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 SPECC1Q5M775 1068 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 FOXD4L5Q5VV16 416 aaPredicted RBP16.02■□□□□ 0.16
DDX39A-217ENST00000592391 KCNT2Q6UVM3 1135 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 USP49Q70CQ1 688 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 THNSL1Q8IYQ7 743 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 KRI1Q8N9T8 703 aaKnown RBP16.02■□□□□ 0.16
DDX39A-217ENST00000592391 LINC00301Q8NCQ3 95 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 POF1BQ8WVV4 589 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 FOXD4L4Q8WXT5 416 aaPredicted RBP16.02■□□□□ 0.16
DDX39A-217ENST00000592391 EPSTI1Q96J88 318 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 ZNF558Q96NG5 402 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 CLIC6Q96NY7 704 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 TRIM6Q9C030 488 aaPredicted RBP16.02■□□□□ 0.16
DDX39A-217ENST00000592391 NSUN3Q9H649 340 aaKnown RBP16.02■□□□□ 0.16
DDX39A-217ENST00000592391 RSAD1Q9HA92 442 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 UBN1Q9NPG3 1134 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 BLOC1S4Q9NUP1 217 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 INPP5FQ9Y2H2 1132 aa16.02■□□□□ 0.16
DDX39A-217ENST00000592391 SPTBN5Q9NRC6 3674 aaKnown RBP16.02■□□□□ 0.15
DDX39A-217ENST00000592391 REV3LO60673 3130 aa16.02■□□□□ 0.15
DDX39A-217ENST00000592391 TTLL13PA6NNM8 815 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 CCDC169A6NNP5 214 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 ITGA4P13612 1032 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 LIG1P18858 919 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 PPM1AP35813 382 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 PLCB3Q01970 1234 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 RAD51AP2Q09MP3 1159 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 PKP1Q13835 747 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 STK38Q15208 465 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 ARSHQ5FYA8 562 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 CDR2LQ86X02 465 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-217ENST00000592391 HACE1Q8IYU2 909 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 URGCPQ8TCY9 931 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 ATXN2LQ8WWM7 1075 aaKnown RBP16.01■□□□□ 0.15
DDX39A-217ENST00000592391 RAD54LQ92698 747 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 SYMPKQ92797 1274 aaKnown RBP16.01■□□□□ 0.15
DDX39A-217ENST00000592391 KMT5AQ9NQR1 393 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 ARHGAP28Q9P2N2 729 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 TFIP11Q9UBB9 837 aaKnown RBP16.01■□□□□ 0.15
DDX39A-217ENST00000592391 KCNG1Q9UIX4 513 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 COG5Q9UP83 839 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 RBM19Q9Y4C8 960 aaKnown RBP16.01■□□□□ 0.15
DDX39A-217ENST00000592391 HES2Q9Y543 173 aa16.01■□□□□ 0.15
DDX39A-217ENST00000592391 PHLPP2Q6ZVD8 1323 aa16■□□□□ 0.15
DDX39A-217ENST00000592391 SFI1A8K8P3 1242 aa16■□□□□ 0.15
DDX39A-217ENST00000592391 K7ERI5 159 aa16■□□□□ 0.15
DDX39A-217ENST00000592391 N4BP3O15049 544 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms