RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SMTNP53814 917 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 GPS2Q13227 327 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 RPS6KA1Q15418 735 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 SUPT20HL1Q3ZLR7 823 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 GLE1Q53GS7 698 aaKnown RBP17.09■□□□□ 0.33
MBD1-227ENST00000592060 SLC39A4Q6P5W5 647 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 ABHD15Q6UXT9 468 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 TMEM117Q9H0C3 514 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 KMT5AQ9NQR1 393 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 XPNPEP1Q9NQW7 623 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 HOXC10Q9NYD6 342 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 HPCAL4Q9UM19 191 aa17.09■□□□□ 0.33
MBD1-227ENST00000592060 ADGRA3Q8IWK6 1321 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 DENND3A2RUS2 1198 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 GOLGA8IPA6NC78 632 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 GOLGA8JA6NMD2 632 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 AARSP49588 968 aaKnown RBP eCLIP17.08■□□□□ 0.33
MBD1-227ENST00000592060 MXI1P50539 228 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 SOX10P56693 466 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 RTP1P59025 263 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 ACTR2P61160 394 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 PRKCEQ02156 737 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 CETN1Q12798 172 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 SWSAP1Q6NVH7 229 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 C8orf74Q6P047 294 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 CBWD2Q8IUF1 395 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 SELENOOQ9BVL4 669 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 STIM2Q9P246 746 aa17.08■□□□□ 0.33
MBD1-227ENST00000592060 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
MBD1-227ENST00000592060 MRPS25P82663 173 aaKnown RBP17.08■□□□□ 0.32
MBD1-227ENST00000592060 SLC7A5Q01650 507 aa17.08■□□□□ 0.32
MBD1-227ENST00000592060 SNRNP35Q16560 246 aaKnown RBP17.08■□□□□ 0.32
MBD1-227ENST00000592060 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.08■□□□□ 0.32
MBD1-227ENST00000592060 MCPH1Q8NEM0 835 aa17.08■□□□□ 0.32
MBD1-227ENST00000592060 RFFLQ8WZ73 363 aa17.08■□□□□ 0.32
MBD1-227ENST00000592060 TAF4BQ92750 862 aa17.08■□□□□ 0.32
MBD1-227ENST00000592060 PBKQ96KB5 322 aa17.08■□□□□ 0.32
MBD1-227ENST00000592060 FBXL18Q96ME1 805 aa17.08■□□□□ 0.32
MBD1-227ENST00000592060 UBE2TQ9NPD8 197 aaPredicted RBP17.08■□□□□ 0.32
MBD1-227ENST00000592060 TMEM59LQ9UK28 342 aa17.08■□□□□ 0.32
MBD1-227ENST00000592060 DGAT1O75907 488 aa17.07■□□□□ 0.32
MBD1-227ENST00000592060 SUPT20HL2P0C7V6 817 aa17.07■□□□□ 0.32
MBD1-227ENST00000592060 CNGA1P29973 690 aa17.07■□□□□ 0.32
MBD1-227ENST00000592060 ICAM3P32942 547 aa17.07■□□□□ 0.32
MBD1-227ENST00000592060 GNPTABQ3T906 1256 aa17.07■□□□□ 0.32
MBD1-227ENST00000592060 PALB2Q86YC2 1186 aa17.07■□□□□ 0.32
MBD1-227ENST00000592060 USP38Q8NB14 1042 aa17.07■□□□□ 0.32
MBD1-227ENST00000592060 CHST13Q8NET6 341 aa17.07■□□□□ 0.32
MBD1-227ENST00000592060 SAAL1Q96ER3 474 aa17.07■□□□□ 0.32
MBD1-227ENST00000592060 ACBD3Q9H3P7 528 aa17.07■□□□□ 0.32
MBD1-227ENST00000592060 SUCLA2Q9P2R7 463 aaPredicted RBP17.07■□□□□ 0.32
MBD1-227ENST00000592060 SEPT9Q9UHD8 586 aaPredicted RBP17.07■□□□□ 0.32
MBD1-227ENST00000592060 KCNK3O14649 394 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 TNFAIP3P21580 790 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 PRKG1Q13976 671 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 VGLL4Q14135 290 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 ZNF771Q7L3S4 317 aaPredicted RBP17.06■□□□□ 0.32
MBD1-227ENST00000592060 NT5DC3Q86UY8 548 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 SLC20A1Q8WUM9 679 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 LMBR1Q8WVP7 490 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 AGPAT1Q99943 283 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 CYP26B1Q9NR63 512 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 TAS2R14Q9NYV8 317 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 ZNFX1Q9P2E3 1918 aaKnown RBP17.06■□□□□ 0.32
MBD1-227ENST00000592060 SP2Q02086 613 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 SP4Q02446 784 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 PPATQ06203 517 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 TREML2Q5T2D2 321 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 MIS18BP1Q6P0N0 1132 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 TAS1R3Q7RTX0 852 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 SYCE1Q8N0S2 351 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 DNERQ8NFT8 737 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 FAM71BQ8TC56 605 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 ACTRT1Q8TDG2 376 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 TMC2Q8TDI7 906 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 PARD3BQ8TEW8 1205 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 KAT5Q92993 513 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 MFSD14AQ96MC6 490 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 ATP6V0A4Q9HBG4 840 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 PRDM4Q9UKN5 801 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 COQ4Q9Y3A0 265 aa17.06■□□□□ 0.32
MBD1-227ENST00000592060 TMCO5BA8MYB1 307 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 LBX2Q6XYB7 198 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 PEX26Q7Z412 305 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 METTL13Q8N6R0 699 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 SEMA4DQ92854 862 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 ARHGEF26Q96DR7 871 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 HES6Q96HZ4 224 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 KREMEN1Q96MU8 473 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 HINFPQ9BQA5 517 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 ZMYND15Q9H091 742 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 TMEM8AQ9HCN3 771 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 OSGEPQ9NPF4 335 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 MED4Q9NPJ6 270 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 GDF3Q9NR23 364 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.05■□□□□ 0.32
MBD1-227ENST00000592060 ARHGAP28Q9P2N2 729 aa17.05■□□□□ 0.32
MBD1-227ENST00000592060 SORBS3O60504 671 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 ATG7O95352 703 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 CYP2C19P33261 490 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms