RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 NDUFB10O96000 172 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 NAT2P11245 290 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 RAG1P15918 1043 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 ETF1P62495 437 aaKnown RBP8.85□□□□□ -0.99
VMP1-213ENST00000591877 SLC7A5Q01650 507 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 PLS1Q14651 629 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 FAM47AQ5JRC9 791 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 EXOSC6Q5RKV6 272 aaKnown RBP8.85□□□□□ -0.99
VMP1-213ENST00000591877 NECAB2Q7Z6G3 386 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 C12orf40Q86WS4 652 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 TP53INP2Q8IXH6 220 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 MRPL41Q8IXM3 137 aaKnown RBP8.85□□□□□ -0.99
VMP1-213ENST00000591877 ZNF444Q8N0Y2 327 aaPredicted RBP8.85□□□□□ -0.99
VMP1-213ENST00000591877 FBXL6Q8N531 539 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 FAM227BQ96M60 508 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 SPATA9Q9BWV2 254 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 NAPBQ9H115 298 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 PRO3102Q9H379 93 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 MROH8Q9H579 483 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 MTMR4Q9NYA4 1195 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 KLHL3Q9UH77 587 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 PFDN2Q9UHV9 154 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 PLIN4Q96Q06 1357 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 PFASO15067 1338 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 COL6A1P12109 1028 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 CYBAP13498 195 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 STAT3P40763 770 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 TFAP4Q01664 338 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 NUCB1Q02818 461 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 MSMPQ1L6U9 139 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 SLC10A6Q3KNW5 377 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 MFSD14CQ5VZR4 134 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 OLFML2BQ68BL8 750 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 SLC6A19Q695T7 634 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 DPP9Q86TI2 863 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 ZNF589Q86UQ0 364 aaPredicted RBP8.84□□□□□ -0.99
VMP1-213ENST00000591877 CHD1LQ86WJ1 897 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 RIOX2Q8IUF8 465 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 ABRAQ8N0Z2 381 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 KCT2Q8NC54 265 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 KLHL6Q8WZ60 621 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 NACAP1Q9BZK3 213 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 RWDD1Q9H446 243 aaPredicted RBP8.84□□□□□ -0.99
VMP1-213ENST00000591877 C11orf49Q9H6J7 331 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 METTL14Q9HCE5 456 aaKnown RBP8.84□□□□□ -0.99
VMP1-213ENST00000591877 IL17RBQ9NRM6 502 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 HELLSQ9NRZ9 838 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 ANAPC4Q9UJX5 808 aa8.84□□□□□ -0.99
VMP1-213ENST00000591877 RANBP2P49792 3224 aaKnown RBP8.83□□□□□ -1
VMP1-213ENST00000591877 MCM3APO60318 1980 aa8.83□□□□□ -1
VMP1-213ENST00000591877 LAMA4Q16363 1823 aa8.83□□□□□ -1
VMP1-213ENST00000591877 MEGF11A6BM72 1044 aa8.83□□□□□ -1
VMP1-213ENST00000591877 SLC25A27O95847 323 aa8.83□□□□□ -1
VMP1-213ENST00000591877 TTLL1O95922 423 aa8.83□□□□□ -1
VMP1-213ENST00000591877 F13BP05160 661 aa8.83□□□□□ -1
VMP1-213ENST00000591877 TSPY3P0CV98 308 aa8.83□□□□□ -1
VMP1-213ENST00000591877 TSPY8P0CW00 308 aa8.83□□□□□ -1
VMP1-213ENST00000591877 FXR1P51114 621 aaKnown RBP eCLIP8.83□□□□□ -1
VMP1-213ENST00000591877 NMIQ13287 307 aaPredicted RBP8.83□□□□□ -1
VMP1-213ENST00000591877 ALX1Q15699 326 aa8.83□□□□□ -1
VMP1-213ENST00000591877 MCMDC2Q4G0Z9 681 aa8.83□□□□□ -1
VMP1-213ENST00000591877 ANKRD34AQ69YU3 496 aa8.83□□□□□ -1
VMP1-213ENST00000591877 NFXL1Q6ZNB6 911 aa8.83□□□□□ -1
VMP1-213ENST00000591877 HID1Q8IV36 788 aa8.83□□□□□ -1
VMP1-213ENST00000591877 RNF214Q8ND24 703 aa8.83□□□□□ -1
VMP1-213ENST00000591877 FAM13CQ8NE31 585 aa8.83□□□□□ -1
VMP1-213ENST00000591877 GMCL1P1Q8NEA9 526 aa8.83□□□□□ -1
VMP1-213ENST00000591877 ZNF507Q8TCN5 953 aa8.83□□□□□ -1
VMP1-213ENST00000591877 MAML3Q96JK9 1138 aa8.83□□□□□ -1
VMP1-213ENST00000591877 SLF1Q9BQI6 1058 aa8.83□□□□□ -1
VMP1-213ENST00000591877 ZNF287Q9HBT7 754 aa8.83□□□□□ -1
VMP1-213ENST00000591877 RAD18Q9NS91 495 aa8.83□□□□□ -1
VMP1-213ENST00000591877 CRIM1Q9NZV1 1036 aa8.83□□□□□ -1
VMP1-213ENST00000591877 DDX20Q9UHI6 824 aaKnown RBP8.83□□□□□ -1
VMP1-213ENST00000591877 SYNPO2Q9UMS6 1093 aa8.83□□□□□ -1
VMP1-213ENST00000591877 RIPK3Q9Y572 518 aa8.83□□□□□ -1
VMP1-213ENST00000591877 NR2E3Q9Y5X4 410 aa8.83□□□□□ -1
VMP1-213ENST00000591877 DNAH12Q6ZR08 3092 aa8.83□□□□□ -1
VMP1-213ENST00000591877 CHURC1-FNTBB4DL54 471 aa8.82□□□□□ -1
VMP1-213ENST00000591877 AGRPO00253 132 aa8.82□□□□□ -1
VMP1-213ENST00000591877 RGS13O14921 159 aa8.82□□□□□ -1
VMP1-213ENST00000591877 TMPRSS2O15393 492 aa8.82□□□□□ -1
VMP1-213ENST00000591877 NMT2O60551 498 aa8.82□□□□□ -1
VMP1-213ENST00000591877 DLGAP3O95886 979 aa8.82□□□□□ -1
VMP1-213ENST00000591877 FGAP02671 866 aa8.82□□□□□ -1
VMP1-213ENST00000591877 PGK2P07205 417 aa8.82□□□□□ -1
VMP1-213ENST00000591877 HSPD1P10809 573 aaKnown RBP8.82□□□□□ -1
VMP1-213ENST00000591877 FCER1AP12319 257 aa8.82□□□□□ -1
VMP1-213ENST00000591877 CNGA1P29973 690 aa8.82□□□□□ -1
VMP1-213ENST00000591877 NOVP48745 357 aa8.82□□□□□ -1
VMP1-213ENST00000591877 PMS1P54277 932 aaKnown RBP8.82□□□□□ -1
VMP1-213ENST00000591877 ZNF792Q3KQV3 632 aa8.82□□□□□ -1
VMP1-213ENST00000591877 PRAMEF19Q5SWL8 479 aa8.82□□□□□ -1
VMP1-213ENST00000591877 KIAA1211LQ6NV74 962 aa8.82□□□□□ -1
VMP1-213ENST00000591877 RASGRP2Q7LDG7 609 aa8.82□□□□□ -1
VMP1-213ENST00000591877 PRPF38AQ8NAV1 312 aaKnown RBP8.82□□□□□ -1
VMP1-213ENST00000591877 TMEM87BQ96K49 555 aa8.82□□□□□ -1
VMP1-213ENST00000591877 TMPRSS13Q9BYE2 586 aa8.82□□□□□ -1
VMP1-213ENST00000591877 KRTAP4-11Q9BYQ6 195 aa8.82□□□□□ -1
VMP1-213ENST00000591877 ATXN3LQ9H3M9 355 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms