RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 GPR75-ASB3A0A0A6YYF3 556 aa14.21□□□□□ -0.14
SMARCA4-216ENST00000591545 LGALS16A8MUM7 142 aa14.21□□□□□ -0.14
SMARCA4-216ENST00000591545 CPB1P15086 417 aa14.21□□□□□ -0.14
SMARCA4-216ENST00000591545 RGS2P41220 211 aa14.21□□□□□ -0.14
SMARCA4-216ENST00000591545 SNX1Q13596 522 aa14.21□□□□□ -0.14
SMARCA4-216ENST00000591545 FAM133BQ5BKY9 247 aaKnown RBP14.21□□□□□ -0.14
SMARCA4-216ENST00000591545 XKR3Q5GH77 459 aa14.21□□□□□ -0.14
SMARCA4-216ENST00000591545 MMS22LQ6ZRQ5 1243 aa14.21□□□□□ -0.14
SMARCA4-216ENST00000591545 GLT1D1Q96MS3 346 aa14.21□□□□□ -0.14
SMARCA4-216ENST00000591545 FAM213AQ9BRX8 229 aa14.21□□□□□ -0.14
SMARCA4-216ENST00000591545 POTEB3A0JP26 581 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 POTECB2RU33 542 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 RPSAP08865 295 aaKnown RBP14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 POTEBQ6S5H4 581 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 KCTD6Q8NC69 237 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 NRBF2Q96F24 287 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 ANGPTL3Q9Y5C1 460 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 LARGE1O95461 756 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 TFRCP02786 760 aaKnown RBP14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 PPP2R3BQ9Y5P8 575 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 USP32Q8NFA0 1604 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 BASP1P80723 227 aaKnown RBP14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 SPARCL1Q14515 664 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 SLC10A5Q5PT55 438 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 LRRC31Q6UY01 552 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 TOGARAM2Q6ZUX3 1019 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 NUDT18Q6ZVK8 323 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 ST13P4Q8IZP2 240 aaPredicted RBP14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 TMEM35BQ8NCS4 154 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 TRIM15Q9C019 465 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 PRR12Q9ULL5 1215 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 STRIP2Q9ULQ0 834 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 ZNF18P17022 549 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 CXCR5P32302 372 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 DNAAF3Q8N9W5 541 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 RUBCNQ92622 972 aa14.2□□□□□ -0.14
SMARCA4-216ENST00000591545 MST1RQ04912 1400 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 CA4P22748 312 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 GCLCP48506 637 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 THOC5Q13769 683 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 TOB2Q14106 344 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 CYFIP1Q7L576 1253 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 TADA2BQ86TJ2 420 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 TAB3Q8N5C8 712 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 HINFPQ9BQA5 517 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 EIF2AK1Q9BQI3 630 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 CENPKQ9BS16 269 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 UBN1Q9NPG3 1134 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 PIN4Q9Y237 131 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 GRID2IPA4D2P6 1211 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 ALDH1A1P00352 501 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 GDAP1Q8TB36 358 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 UPF3AQ9H1J1 476 aaKnown RBP14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 STXBP3O00186 592 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 KRT37O76014 449 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 NR3C1P04150 777 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 MX2P20592 715 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 AP3M2P53677 418 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 IQCB1Q15051 598 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 KRT80Q6KB66 452 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 YAF2Q8IY57 180 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 TTC25Q96NG3 672 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 NUDCD1Q96RS6 583 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 TIPINQ9BVW5 301 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 SMYD2Q9NRG4 433 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 CHUKO15111 745 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 SRGNP10124 158 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 GNASQ5JWF2 1037 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 CC2D1AQ6P1N0 951 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 STAG2Q8N3U4 1231 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 TTC13Q8NBP0 860 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 RNF149Q8NC42 400 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 ZNF668Q96K58 619 aaPredicted RBP14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 PLAAQ9Y263 795 aa14.19□□□□□ -0.14
SMARCA4-216ENST00000591545 SPATA31D1Q6ZQQ2 1576 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 GNGT2O14610 69 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 APOEP02649 317 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 TBXAS1P24557 533 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 PPARGP37231 505 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 PCGF5Q86SE9 256 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 PYROXD1Q8WU10 500 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 RBM41Q96IZ5 413 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 CCDC138Q96M89 665 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 TMEM60Q9H2L4 133 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 TUFT1Q9NNX1 390 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 NGRNQ9NPE2 291 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 SUCLA2Q9P2R7 463 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 NFU1Q9UMS0 254 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 ART3Q13508 389 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 ABHD10Q9NUJ1 306 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 TOM1L1O75674 476 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 DGAT1O75907 488 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 ATP1A3P13637 1013 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 CPT1AP50416 773 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 CYP27A1Q02318 531 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 MXD4Q14582 209 aaPredicted RBP14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 XRRA1Q6P2D8 792 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 XAB2Q9HCS7 855 aaKnown RBP14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 POTEFA5A3E0 1075 aa14.18□□□□□ -0.14
SMARCA4-216ENST00000591545 MAFGO15525 162 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms