RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 TSHZ2Q9NRE2 1034 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 NR2E1Q9Y466 385 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 IRAK3Q9Y616 596 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 ZNF318Q5VUA4 2279 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 ASAP2O43150 1006 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 GAS2O43903 313 aaKnown RBP24.29■■□□□ 1.48
DDX39A-215ENST00000590696 B4GALT3O60512 393 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 GIT2Q14161 759 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 UBXN11Q5T124 520 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 FERMT3Q86UX7 667 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 TPH2Q8IWU9 490 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 SUGP1Q8IWZ8 645 aaKnown RBP24.29■■□□□ 1.48
DDX39A-215ENST00000590696 NECAB1Q8N987 351 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 RNF149Q8NC42 400 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 NECTIN4Q96NY8 510 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 RSAD1Q9HA92 442 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 BRMS1Q9HCU9 246 aa24.29■■□□□ 1.48
DDX39A-215ENST00000590696 DDHD2O94830 711 aa24.28■■□□□ 1.48
DDX39A-215ENST00000590696 SLITRK3O94933 977 aa24.28■■□□□ 1.48
DDX39A-215ENST00000590696 EPCAMP16422 314 aa24.28■■□□□ 1.48
DDX39A-215ENST00000590696 AFF1P51825 1210 aaKnown RBP24.28■■□□□ 1.48
DDX39A-215ENST00000590696 RARS2Q5T160 578 aaKnown RBP24.28■■□□□ 1.48
DDX39A-215ENST00000590696 ZBTB33Q86T24 672 aa24.28■■□□□ 1.48
DDX39A-215ENST00000590696 FBXL6Q8N531 539 aa24.28■■□□□ 1.48
DDX39A-215ENST00000590696 C12orf76Q8N812 135 aaPredicted RBP24.28■■□□□ 1.48
DDX39A-215ENST00000590696 TNFRSF25Q93038 417 aa24.28■■□□□ 1.48
DDX39A-215ENST00000590696 MTRQ99707 1265 aa24.28■■□□□ 1.48
DDX39A-215ENST00000590696 NEFLP07196 543 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 WEE2P0C1S8 567 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 MTHFRP42898 656 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 MRE11P49959 708 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 ME3Q16798 604 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 IER5LQ5T953 404 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 KANK3Q6NY19 840 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 ASIC4Q96FT7 647 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 RIPOR3Q96MK2 946 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 FAM193BQ96PV7 902 aaPredicted RBP24.27■■□□□ 1.48
DDX39A-215ENST00000590696 EIF2AK1Q9BQI3 630 aaKnown RBP24.27■■□□□ 1.48
DDX39A-215ENST00000590696 VN1R3Q9BXE9 311 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 DZANK1Q9NVP4 752 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 CNTNAP2Q9UHC6 1331 aa24.27■■□□□ 1.48
DDX39A-215ENST00000590696 C2CD4DB7Z1M9 353 aa24.26■■□□□ 1.47
DDX39A-215ENST00000590696 ERLIN2O94905 339 aa24.26■■□□□ 1.47
DDX39A-215ENST00000590696 LARGE1O95461 756 aa24.26■■□□□ 1.47
DDX39A-215ENST00000590696 ALDH2P05091 517 aa24.26■■□□□ 1.47
DDX39A-215ENST00000590696 PRSS33Q8NF86 280 aa24.26■■□□□ 1.47
DDX39A-215ENST00000590696 SLC22A17Q8WUG5 538 aa24.26■■□□□ 1.47
DDX39A-215ENST00000590696 XPNPEP1Q9NQW7 623 aa24.26■■□□□ 1.47
DDX39A-215ENST00000590696 KANSL3Q9P2N6 904 aa24.26■■□□□ 1.47
DDX39A-215ENST00000590696 PCDHA12Q9UN75 941 aa24.26■■□□□ 1.47
DDX39A-215ENST00000590696 ARID2Q68CP9 1835 aa24.26■■□□□ 1.47
DDX39A-215ENST00000590696 POMCP01189 267 aa24.25■■□□□ 1.47
DDX39A-215ENST00000590696 NCLP19338 710 aaKnown RBP24.25■■□□□ 1.47
DDX39A-215ENST00000590696 PTPN14Q15678 1187 aa24.25■■□□□ 1.47
DDX39A-215ENST00000590696 SMG8Q8ND04 991 aaKnown RBP24.25■■□□□ 1.47
DDX39A-215ENST00000590696 CNNM3Q8NE01 707 aa24.25■■□□□ 1.47
DDX39A-215ENST00000590696 GTF3C6Q969F1 213 aa24.25■■□□□ 1.47
DDX39A-215ENST00000590696 TMEM175Q9BSA9 504 aa24.25■■□□□ 1.47
DDX39A-215ENST00000590696 FAN1Q9Y2M0 1017 aa24.25■■□□□ 1.47
DDX39A-215ENST00000590696 NRP1O14786 923 aa24.24■■□□□ 1.47
DDX39A-215ENST00000590696 SSBP05455 408 aaKnown RBP eCLIP24.24■■□□□ 1.47
DDX39A-215ENST00000590696 ITGA4P13612 1032 aa24.24■■□□□ 1.47
DDX39A-215ENST00000590696 PTENP60484 403 aa24.24■■□□□ 1.47
DDX39A-215ENST00000590696 MXD4Q14582 209 aaPredicted RBP24.24■■□□□ 1.47
DDX39A-215ENST00000590696 CALCRLQ16602 461 aa24.24■■□□□ 1.47
DDX39A-215ENST00000590696 ATAT1Q5SQI0 421 aa24.24■■□□□ 1.47
DDX39A-215ENST00000590696 KIAA1841Q6NSI8 718 aa24.24■■□□□ 1.47
DDX39A-215ENST00000590696 PPFIBP1Q86W92 1011 aa24.24■■□□□ 1.47
DDX39A-215ENST00000590696 KREMEN2Q8NCW0 462 aa24.24■■□□□ 1.47
DDX39A-215ENST00000590696 HSD17B14Q9BPX1 270 aa24.24■■□□□ 1.47
DDX39A-215ENST00000590696 STK39Q9UEW8 545 aa24.24■■□□□ 1.47
DDX39A-215ENST00000590696 BTBD18B2RXH4 712 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 TSPAN1O60635 241 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 LYPLA2O95372 231 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 AXLP30530 894 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 FOSBP53539 338 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 PCBP1Q15365 356 aaKnown RBP eCLIP24.23■■□□□ 1.47
DDX39A-215ENST00000590696 CABP7Q86V35 215 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 NSUN7Q8NE18 718 aaKnown RBP24.23■■□□□ 1.47
DDX39A-215ENST00000590696 CPB2Q96IY4 423 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 KLHL5Q96PQ7 755 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 EIF2AQ9BY44 585 aaKnown RBP24.23■■□□□ 1.47
DDX39A-215ENST00000590696 TTC12Q9H892 705 aaPredicted RBP24.23■■□□□ 1.47
DDX39A-215ENST00000590696 UBN1Q9NPG3 1134 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 ANKEF1Q9NU02 776 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 IPPQ9Y573 584 aa24.23■■□□□ 1.47
DDX39A-215ENST00000590696 INO80B-WBP1J3KQ70 363 aa24.22■■□□□ 1.47
DDX39A-215ENST00000590696 TXKP42681 527 aa24.22■■□□□ 1.47
DDX39A-215ENST00000590696 TFDP1Q14186 410 aa24.22■■□□□ 1.47
DDX39A-215ENST00000590696 TMC5Q6UXY8 1006 aa24.22■■□□□ 1.47
DDX39A-215ENST00000590696 DIS3L2Q8IYB7 885 aaKnown RBP24.22■■□□□ 1.47
DDX39A-215ENST00000590696 PRRX2Q99811 253 aa24.22■■□□□ 1.47
DDX39A-215ENST00000590696 EMILIN2Q9BXX0 1053 aa24.22■■□□□ 1.47
DDX39A-215ENST00000590696 RNF39Q9H2S5 420 aa24.22■■□□□ 1.47
DDX39A-215ENST00000590696 DBR1Q9UK59 544 aaKnown RBP24.22■■□□□ 1.47
DDX39A-215ENST00000590696 SORCS3Q9UPU3 1222 aa24.22■■□□□ 1.47
DDX39A-215ENST00000590696 WNT7AO00755 349 aa24.21■■□□□ 1.47
DDX39A-215ENST00000590696 NEMFO60524 1076 aa24.21■■□□□ 1.47
DDX39A-215ENST00000590696 JAK2O60674 1132 aa24.21■■□□□ 1.47
DDX39A-215ENST00000590696 DGAT1O75907 488 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms