RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 GNPTABQ3T906 1256 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 ZC2HC1CQ53FD0 456 aaPredicted RBP10.84□□□□□ -0.67
VPS25-202ENST00000589219 WDR93Q6P2C0 686 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 CATSPERGQ6ZRH7 1159 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 INTS8Q75QN2 995 aaKnown RBP10.84□□□□□ -0.67
VPS25-202ENST00000589219 VSIG10LQ86VR7 867 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 MSL3Q8N5Y2 521 aaKnown RBP10.84□□□□□ -0.67
VPS25-202ENST00000589219 NSUN6Q8TEA1 469 aaKnown RBP10.84□□□□□ -0.67
VPS25-202ENST00000589219 GTF3C2Q8WUA4 911 aaPredicted RBP10.84□□□□□ -0.67
VPS25-202ENST00000589219 ATP6V0A1Q93050 837 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 INPP4AQ96PE3 977 aaPredicted RBP10.84□□□□□ -0.67
VPS25-202ENST00000589219 UNC93B1Q9H1C4 597 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 MLXIPQ9HAP2 919 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 SIX2Q9NPC8 291 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 MORF4L1Q9UBU8 362 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 ZNF214Q9UL59 606 aaPredicted RBP10.84□□□□□ -0.67
VPS25-202ENST00000589219 TFR2Q9UP52 801 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 EXOC7Q9UPT5 735 aa10.84□□□□□ -0.67
VPS25-202ENST00000589219 SPDYE4A6NLX3 237 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 H0YGN5 161 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 ENC1O14682 589 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 ZBTB39O15060 712 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 EXOC3O60645 756 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 FARP2O94887 1054 aaPredicted RBP10.83□□□□□ -0.68
VPS25-202ENST00000589219 TFRCP02786 760 aaKnown RBP10.83□□□□□ -0.68
VPS25-202ENST00000589219 NR3C2P08235 984 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 SLC9A1P19634 815 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 CYP2J2P51589 502 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 FAM193AP78312 1265 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 CBX1P83916 185 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 GTF2BQ00403 316 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 KCNA1Q09470 495 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 CETN1Q12798 172 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 NAB2Q15742 525 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 MAP9Q49MG5 647 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 OTUD6AQ7L8S5 288 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 UBE2Q1Q7Z7E8 422 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 CHST13Q8NET6 341 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 GPRC5AQ8NFJ5 357 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 KIFAP3Q92845 792 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 ZFP91Q96JP5 570 aaPredicted RBP10.83□□□□□ -0.68
VPS25-202ENST00000589219 MOV10L1Q9BXT6 1211 aaKnown RBP10.83□□□□□ -0.68
VPS25-202ENST00000589219 INTS2Q9H0H0 1204 aaKnown RBP10.83□□□□□ -0.68
VPS25-202ENST00000589219 C17orf75Q9HAS0 396 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 HDAC6Q9UBN7 1215 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 RNF14Q9UBS8 474 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 INTUQ9ULD6 942 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 PCDHGC5Q9Y5F6 944 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 NR2E3Q9Y5X4 410 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 RLFQ13129 1914 aa10.83□□□□□ -0.68
VPS25-202ENST00000589219 SMCHD1A6NHR9 2005 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 CEP290O15078 2479 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 A0A0A6YYK5 440 aaPredicted RBP10.82□□□□□ -0.68
VPS25-202ENST00000589219 H0YCG3 227 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 BACH1O14867 736 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 PMM2O15305 246 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 CCNE2O96020 404 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 HMGCRP04035 888 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 PSAPP07602 524 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 ACTN1P12814 892 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 SCP2P22307 547 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 RTP1P59025 263 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 ENPEPQ07075 957 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 UGCGQ16739 394 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 LONRF2Q1L5Z9 754 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 IRF2BP2Q7Z5L9 587 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 MCPH1Q8NEM0 835 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 SPIRE2Q8WWL2 714 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 DEFB118Q96PH6 123 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.82□□□□□ -0.68
VPS25-202ENST00000589219 STK33Q9BYT3 514 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 BCAS3Q9H6U6 928 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 PAK6Q9NQU5 681 aaPredicted RBP10.82□□□□□ -0.68
VPS25-202ENST00000589219 HOXC10Q9NYD6 342 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 APEX2Q9UBZ4 518 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 NENFQ9UMX5 172 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 PCDHA10Q9Y5I2 948 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 DUSP10Q9Y6W6 482 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 PFASO15067 1338 aa10.82□□□□□ -0.68
VPS25-202ENST00000589219 A0A087X0T9 212 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 GRID2IPA4D2P6 1211 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 SPDYE16A6NNV3 312 aaPredicted RBP10.81□□□□□ -0.68
VPS25-202ENST00000589219 F8VZ95 297 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 CES2O00748 559 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 EIF3JO75822 258 aaKnown RBP10.81□□□□□ -0.68
VPS25-202ENST00000589219 SEC31AO94979 1220 aaKnown RBP10.81□□□□□ -0.68
VPS25-202ENST00000589219 RHOXF2BP0C7M4 288 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 FAM228BP0C875 321 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 KCNA2P16389 499 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 MAPK4P31152 587 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 SOX5P35711 763 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 PAFAH1B1P43034 410 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 SMTNP53814 917 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 MCCD1P59942 119 aaPredicted RBP10.81□□□□□ -0.68
VPS25-202ENST00000589219 PTK2Q05397 1052 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 GPS2Q13227 327 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 DMP1Q13316 513 aaPredicted RBP10.81□□□□□ -0.68
VPS25-202ENST00000589219 TMEM132BQ14DG7 1078 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 XKR9Q5GH70 373 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 CCDC181Q5TID7 509 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms