RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 SFPQP23246 707 aaKnown RBP eCLIP16.96■□□□□ 0.31
SF3A2-204ENST00000589118 UBXN11Q5T124 520 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 MIER3Q7Z3K6 550 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 PALB2Q86YC2 1186 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 RABGGTAQ92696 567 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 RPP25Q9BUL9 199 aaKnown RBP16.96■□□□□ 0.31
SF3A2-204ENST00000589118 TRAIPQ9BWF2 469 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 TEKT3Q9BXF9 490 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 NIFKQ9BYG3 293 aaKnown RBP16.96■□□□□ 0.31
SF3A2-204ENST00000589118 FOXQ1Q9C009 403 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 IFT122Q9HBG6 1241 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 MRPL17Q9NRX2 175 aaKnown RBP16.96■□□□□ 0.31
SF3A2-204ENST00000589118 MIOSQ9NXC5 875 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 VPS54Q9P1Q0 977 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 IGSF9Q9P2J2 1179 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 WNT16Q9UBV4 365 aa16.96■□□□□ 0.31
SF3A2-204ENST00000589118 MTCL1Q9Y4B5 1905 aaKnown RBP16.96■□□□□ 0.3
SF3A2-204ENST00000589118 ESYT2A0FGR8 921 aa16.95■□□□□ 0.3
SF3A2-204ENST00000589118 PSMD10O75832 226 aa16.95■□□□□ 0.3
SF3A2-204ENST00000589118 SP9P0CG40 484 aa16.95■□□□□ 0.3
SF3A2-204ENST00000589118 NPEPPSP55786 919 aa16.95■□□□□ 0.3
SF3A2-204ENST00000589118 C15orf39Q6ZRI6 1047 aa16.95■□□□□ 0.3
SF3A2-204ENST00000589118 TEX2Q8IWB9 1127 aa16.95■□□□□ 0.3
SF3A2-204ENST00000589118 SMG7Q92540 1137 aaKnown RBP16.95■□□□□ 0.3
SF3A2-204ENST00000589118 ZNF707Q96C28 371 aaPredicted RBP16.95■□□□□ 0.3
SF3A2-204ENST00000589118 FAM193BQ96PV7 902 aaPredicted RBP16.95■□□□□ 0.3
SF3A2-204ENST00000589118 WDR6Q9NNW5 1121 aaKnown RBP16.95■□□□□ 0.3
SF3A2-204ENST00000589118 DLGAP2Q9P1A6 1054 aa16.95■□□□□ 0.3
SF3A2-204ENST00000589118 CLUHO75153 1309 aa16.95■□□□□ 0.3
SF3A2-204ENST00000589118 TDRD15B5MCY1 1934 aaKnown RBP16.94■□□□□ 0.3
SF3A2-204ENST00000589118 MYH15Q9Y2K3 1946 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 MAFO75444 373 aaPredicted RBP16.94■□□□□ 0.3
SF3A2-204ENST00000589118 TDP2O95551 362 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 SRGAP2CP0DJJ0 459 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 OR1G1P47890 313 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 DNM2P50570 870 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 XKR3Q5GH77 459 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 ANO5Q75V66 913 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 MRPL10Q7Z7H8 261 aaKnown RBP16.94■□□□□ 0.3
SF3A2-204ENST00000589118 ZNF710Q8N1W2 664 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 URGCPQ8TCY9 931 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 RPS6KC1Q96S38 1066 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 RIT2Q99578 217 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 RSAD1Q9HA92 442 aa16.94■□□□□ 0.3
SF3A2-204ENST00000589118 PRPF3O43395 683 aaKnown RBP16.93■□□□□ 0.3
SF3A2-204ENST00000589118 SOD2P04179 222 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 SKIP12755 728 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 RPL17P18621 184 aaKnown RBP16.93■□□□□ 0.3
SF3A2-204ENST00000589118 HOXA11P31270 313 aaPredicted RBP16.93■□□□□ 0.3
SF3A2-204ENST00000589118 JAK3P52333 1124 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 KIAA0319Q5VV43 1072 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 Q6ZUG5 572 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 GET4Q7L5D6 327 aaPredicted RBP16.93■□□□□ 0.3
SF3A2-204ENST00000589118 MAML2Q8IZL2 1156 aaPredicted RBP16.93■□□□□ 0.3
SF3A2-204ENST00000589118 SMG8Q8ND04 991 aaKnown RBP16.93■□□□□ 0.3
SF3A2-204ENST00000589118 TMEM143Q96AN5 459 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 PGBD4Q96DM1 585 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 AGPAT5Q9NUQ2 364 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 CACNG4Q9UBN1 327 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 SIT1Q9Y3P8 196 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 HES2Q9Y543 173 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 NCOR2Q9Y618 2525 aa16.93■□□□□ 0.3
SF3A2-204ENST00000589118 CEP250Q9BV73 2442 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 OTOGLQ3ZCN5 2332 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 MIA3Q5JRA6 1907 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 EML1O00423 815 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 URODP06132 367 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 SRFP11831 508 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 GNA11P29992 359 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 SFNP31947 248 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 RAB27AP51159 221 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 B3GNT9Q6UX72 402 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 ZNF410Q86VK4 478 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 COLGALT2Q8IYK4 626 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 CMASQ8NFW8 434 aaPredicted RBP16.92■□□□□ 0.3
SF3A2-204ENST00000589118 TBCKQ8TEA7 893 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 BRF1Q92994 677 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 CNTNAP3BQ96NU0 1288 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 TMEM175Q9BSA9 504 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 HERC2P3Q9BVR0 1158 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 EIF2AQ9BY44 585 aaKnown RBP16.92■□□□□ 0.3
SF3A2-204ENST00000589118 CNTNAP3Q9BZ76 1288 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 INO80BQ9C086 356 aaPredicted RBP16.92■□□□□ 0.3
SF3A2-204ENST00000589118 NT5C3AQ9H0P0 336 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 PIDD1Q9HB75 910 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 WRAP73Q9P2S5 460 aaPredicted RBP16.92■□□□□ 0.3
SF3A2-204ENST00000589118 EPS15L1Q9UBC2 864 aa16.92■□□□□ 0.3
SF3A2-204ENST00000589118 MTF2Q9Y483 593 aaPredicted RBP16.92■□□□□ 0.3
SF3A2-204ENST00000589118 FRYLO94915 3013 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 GLUD1P00367 558 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 LAMP2P13473 410 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 CCT2P78371 535 aaKnown RBP16.91■□□□□ 0.3
SF3A2-204ENST00000589118 NTHL1P78549 312 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 FGD1P98174 961 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 NTRK3Q16288 839 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 RSPO4Q2I0M5 234 aaPredicted RBP16.91■□□□□ 0.3
SF3A2-204ENST00000589118 RNF20Q5VTR2 975 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 DCLRE1AQ6PJP8 1040 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 C1orf210Q8IVY1 113 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms