RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 LETM2Q2VYF4 491 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 TMC5Q6UXY8 1006 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 GPR149Q86SP6 731 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 TMEM105Q8N8V8 129 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 PRPF31Q8WWY3 499 aaKnown RBP15.73■□□□□ 0.11
DNMT1-213ENST00000587604 PSPC1Q8WXF1 523 aaKnown RBP15.73■□□□□ 0.11
DNMT1-213ENST00000587604 CEP170P1Q96L14 293 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 AIFM3Q96NN9 605 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 KLHL5Q96PQ7 755 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 FAM193BQ96PV7 902 aaPredicted RBP15.73■□□□□ 0.11
DNMT1-213ENST00000587604 TMEM175Q9BSA9 504 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 EMILIN2Q9BXX0 1053 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 SLKQ9H2G2 1235 aaPredicted RBP15.73■□□□□ 0.11
DNMT1-213ENST00000587604 SMOC2Q9H3U7 446 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 DHX33Q9H6R0 707 aaKnown RBP15.73■□□□□ 0.11
DNMT1-213ENST00000587604 SFXN1Q9H9B4 322 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 KCNMB3Q9NPA1 279 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 VAV3Q9UKW4 847 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 CYP46A1Q9Y6A2 500 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 DMDP11532 3685 aa15.73■□□□□ 0.11
DNMT1-213ENST00000587604 CNTNAP2Q9UHC6 1331 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 PLXNA3P51805 1871 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 DENND4AQ7Z401 1863 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 PROB1E7EW31 1015 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 LILRB3O75022 631 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 CNPP09543 421 aaKnown RBP15.72■□□□□ 0.11
DNMT1-213ENST00000587604 SRGAP2CP0DJJ0 459 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 KLRC2P26717 231 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 HOXA11P31270 313 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-213ENST00000587604 RFC5P40937 340 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 CLCN4P51793 760 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 ASTLQ6HA08 431 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-213ENST00000587604 PPP4R3AQ6IN85 833 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 ZNF579Q8NAF0 562 aaKnown RBP15.72■□□□□ 0.11
DNMT1-213ENST00000587604 TMEM143Q96AN5 459 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 ACSF2Q96CM8 615 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-213ENST00000587604 TM6SF1Q9BZW5 370 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 MINDY3Q9H8M7 445 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 RSAD1Q9HA92 442 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 FAN1Q9Y2M0 1017 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 C2orf16Q68DN1 1984 aa15.72■□□□□ 0.11
DNMT1-213ENST00000587604 CCDC194A0A1B0GVG4 234 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 ASAP2O43150 1006 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 GCFC2P16383 781 aaKnown RBP15.71■□□□□ 0.11
DNMT1-213ENST00000587604 CLCN5P51795 746 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 AFF1P51825 1210 aaKnown RBP15.71■□□□□ 0.11
DNMT1-213ENST00000587604 LAMTOR4Q0VGL1 99 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 UBXN11Q5T124 520 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 CCDC149Q6ZUS6 474 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 OTUD6AQ7L8S5 288 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 OTOP3Q7RTS5 596 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 NEK8Q86SG6 692 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 C4orf19Q8IY42 314 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 CNNM3Q8NE01 707 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 FEZF2Q8TBJ5 459 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 TCP11Q8WWU5 503 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 LARP6Q9BRS8 491 aaKnown RBP15.71■□□□□ 0.11
DNMT1-213ENST00000587604 PHF20Q9BVI0 1012 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 UBN1Q9NPG3 1134 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 MRPL17Q9NRX2 175 aaKnown RBP15.71■□□□□ 0.11
DNMT1-213ENST00000587604 WRAP73Q9P2S5 460 aaPredicted RBP15.71■□□□□ 0.11
DNMT1-213ENST00000587604 KCNJ14Q9UNX9 436 aa15.71■□□□□ 0.11
DNMT1-213ENST00000587604 SPDYE4A6NLX3 237 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 NRP1O14786 923 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 TBX3O15119 743 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 GAS2O43903 313 aaKnown RBP15.7■□□□□ 0.1
DNMT1-213ENST00000587604 POMCP01189 267 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 SSBP05455 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
DNMT1-213ENST00000587604 NCLP19338 710 aaKnown RBP15.7■□□□□ 0.1
DNMT1-213ENST00000587604 YWHABP31946 246 aaKnown RBP15.7■□□□□ 0.1
DNMT1-213ENST00000587604 STK3Q13188 491 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 PCBP1Q15365 356 aaKnown RBP eCLIP15.7■□□□□ 0.1
DNMT1-213ENST00000587604 EPHA7Q15375 998 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 C15orf39Q6ZRI6 1047 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 FERMT3Q86UX7 667 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 HAS1Q92839 578 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 MFSD1Q9H3U5 465 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 SSX2IPQ9Y2D8 614 aa15.7■□□□□ 0.1
DNMT1-213ENST00000587604 CCNT1O60563 726 aaKnown RBP15.69■□□□□ 0.1
DNMT1-213ENST00000587604 SOD2P04179 222 aa15.69■□□□□ 0.1
DNMT1-213ENST00000587604 TDGQ13569 410 aa15.69■□□□□ 0.1
DNMT1-213ENST00000587604 RNF149Q8NC42 400 aa15.69■□□□□ 0.1
DNMT1-213ENST00000587604 NAP1L4Q99733 375 aaKnown RBP15.69■□□□□ 0.1
DNMT1-213ENST00000587604 LXNQ9BS40 222 aa15.69■□□□□ 0.1
DNMT1-213ENST00000587604 ZSWIM4Q9H7M6 989 aa15.69■□□□□ 0.1
DNMT1-213ENST00000587604 VPS13AQ96RL7 3174 aa15.69■□□□□ 0.1
DNMT1-213ENST00000587604 TDRD15B5MCY1 1934 aaKnown RBP15.68■□□□□ 0.1
DNMT1-213ENST00000587604 MTCL1Q9Y4B5 1905 aaKnown RBP15.68■□□□□ 0.1
DNMT1-213ENST00000587604 INPPL1O15357 1258 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 MARCH6O60337 910 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 CDKL5O76039 1030 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 ERLIN2O94905 339 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 URODP06132 367 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 ITGA4P13612 1032 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 XBP1P17861 261 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 AXLP30530 894 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 NBL1P41271 181 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 EMC2Q15006 297 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 XKR9Q5GH70 373 aa15.68■□□□□ 0.1
DNMT1-213ENST00000587604 COLGALT2Q8IYK4 626 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms