RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 NT5C1B-RDH14C9J2C7 533 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 FAM86B1E9PN63 330 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 DTNBO60941 627 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 GPR32O75388 356 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 CSDE1O75534 798 aaKnown RBP8.73□□□□□ -1.01
VMP1-204ENST00000587259 C22orf31O95567 290 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 ASGR2P07307 311 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 FAM86B2P0C5J1 330 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 LIG1P18858 919 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 CA8P35219 290 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 KCNC3Q14003 757 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 PTPAQ15257 358 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 PTPN21Q16825 1174 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 CEP55Q53EZ4 464 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 TTC38Q5R3I4 469 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 JAKMIP3Q5VZ66 844 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 ARL6IP4Q66PJ3 421 aaKnown RBP8.73□□□□□ -1.01
VMP1-204ENST00000587259 ANKRD54Q6NXT1 300 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 PDXDC2PQ6P474 469 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 ABHD15Q6UXT9 468 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 PLPPR4Q7Z2D5 763 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 KRT25Q7Z3Z0 450 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 ZBTB33Q86T24 672 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 LRRC71Q8N4P6 559 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 METTL13Q8N6R0 699 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 KREMEN2Q8NCW0 462 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 AUTS2Q8WXX7 1259 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 ATOH1Q92858 354 aaPredicted RBP8.73□□□□□ -1.01
VMP1-204ENST00000587259 GJA10Q969M2 543 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 CASD1Q96PB1 797 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 NAP1L4Q99733 375 aaKnown RBP8.73□□□□□ -1.01
VMP1-204ENST00000587259 NAT10Q9H0A0 1025 aaKnown RBP8.73□□□□□ -1.01
VMP1-204ENST00000587259 ZMYND12Q9H0C1 365 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 POMKQ9H5K3 350 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 GJB4Q9NTQ9 266 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 USP25Q9UHP3 1055 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 CACNA1HO95180 2353 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 NFASCO94856 1347 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 KDM3AQ9Y4C1 1321 aa8.73□□□□□ -1.01
VMP1-204ENST00000587259 MYO15AQ9UKN7 3530 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 EVPLQ92817 2033 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 IGKV6D-21A0A0A0MT36 114 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 SMCO2A6NFE2 343 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 MEIS1O00470 390 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 DHX15O43143 795 aaKnown RBP8.72□□□□□ -1.01
VMP1-204ENST00000587259 NR1I2O75469 434 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 ATG7O95352 703 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 XRCC6P12956 609 aaKnown RBP eCLIP8.72□□□□□ -1.01
VMP1-204ENST00000587259 TXLNAP40222 546 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 SYKP43405 635 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 ADCY7P51828 1080 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 DSC3Q14574 896 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 STX1AQ16623 288 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 CLLU1OSQ5K130 101 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 RESP18Q5W5W9 173 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 SLC24A5Q71RS6 500 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 ASCL5Q7RTU5 278 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 PLA2G4DQ86XP0 818 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 CKAP2LQ8IYA6 745 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 FMR1NBQ8N0W7 255 aaPredicted RBP8.72□□□□□ -1.01
VMP1-204ENST00000587259 REXO1Q8N1G1 1221 aaKnown RBP8.72□□□□□ -1.01
VMP1-204ENST00000587259 TMEM105Q8N8V8 129 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 TNFRSF25Q93038 417 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 ATP6V0A4Q9HBG4 840 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 RIC8AQ9NPQ8 531 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 ZNF302Q9NR11 478 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 SRPRBQ9Y5M8 271 aaKnown RBP8.72□□□□□ -1.01
VMP1-204ENST00000587259 SQORQ9Y6N5 450 aa8.72□□□□□ -1.01
VMP1-204ENST00000587259 IGLV3-22A0A075B6J6 115 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 TMEM150BA6NC51 233 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 HBP1O60381 514 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 PFKFB1P16118 471 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 ATF7P17544 494 aaPredicted RBP8.71□□□□□ -1.02
VMP1-204ENST00000587259 ZNF76P36508 570 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 NLRP11P59045 1033 aaKnown RBP8.71□□□□□ -1.02
VMP1-204ENST00000587259 ATP2C1P98194 919 aaPredicted RBP8.71□□□□□ -1.02
VMP1-204ENST00000587259 NR5A1Q13285 461 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 SNW1Q13573 536 aaKnown RBP8.71□□□□□ -1.02
VMP1-204ENST00000587259 UGCGQ16739 394 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 RARS2Q5T160 578 aaKnown RBP8.71□□□□□ -1.02
VMP1-204ENST00000587259 AXDND1Q5T1B0 1012 aaPredicted RBP8.71□□□□□ -1.02
VMP1-204ENST00000587259 FAM160B1Q5W0V3 765 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 KCNT2Q6UVM3 1135 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 TMC7Q7Z402 723 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 TMEM173Q86WV6 379 aaPredicted RBP8.71□□□□□ -1.02
VMP1-204ENST00000587259 GAS2L3Q86XJ1 694 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 NME8Q8N427 588 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 ENGASEQ8NFI3 743 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 FAM200AQ8TCP9 573 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 RASGRP4Q8TDF6 673 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 HELQQ8TDG4 1101 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 SH2D3AQ9BRG2 576 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 FUCA2Q9BTY2 467 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 AAASQ9NRG9 546 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 ANO10Q9NW15 660 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 TMEM161AQ9NX61 479 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 AKT3Q9Y243 479 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 HCFC2Q9Y5Z7 792 aa8.71□□□□□ -1.02
VMP1-204ENST00000587259 PLXNA3P51805 1871 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms