RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 CRKP46108 304 aa18.19■□□□□ 0.5
CIRBP-212ENST00000587169 PLCB4Q15147 1175 aa18.19■□□□□ 0.5
CIRBP-212ENST00000587169 SYCP3Q8IZU3 236 aa18.19■□□□□ 0.5
CIRBP-212ENST00000587169 MGARPQ8TDB4 240 aa18.19■□□□□ 0.5
CIRBP-212ENST00000587169 ATXN2LQ8WWM7 1075 aaKnown RBP18.19■□□□□ 0.5
CIRBP-212ENST00000587169 CCDC17Q96LX7 622 aa18.19■□□□□ 0.5
CIRBP-212ENST00000587169 AGPAT1Q99943 283 aa18.19■□□□□ 0.5
CIRBP-212ENST00000587169 POLR3CQ9BUI4 534 aaPredicted RBP18.19■□□□□ 0.5
CIRBP-212ENST00000587169 MLXIPLQ9NP71 852 aa18.19■□□□□ 0.5
CIRBP-212ENST00000587169 ADAMTSL1Q8N6G6 1762 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 IGLV3-22A0A075B6J6 115 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 VIMP08670 466 aaKnown RBP18.18■□□□□ 0.5
CIRBP-212ENST00000587169 COMTP21964 271 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 GCLMP48507 274 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 SNCBQ16143 134 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 FAM133BQ5BKY9 247 aaKnown RBP18.18■□□□□ 0.5
CIRBP-212ENST00000587169 HOOK3Q86VS8 718 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 DNAJC17Q9NVM6 304 aaKnown RBP18.18■□□□□ 0.5
CIRBP-212ENST00000587169 APBA3O96018 575 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 PYGMP11217 842 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 EIF3BP55884 814 aaKnown RBP18.18■□□□□ 0.5
CIRBP-212ENST00000587169 DRP2Q13474 957 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 RPUSD2Q8IZ73 545 aaKnown RBP18.18■□□□□ 0.5
CIRBP-212ENST00000587169 CCDC197Q8NCU1 140 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 SGSM3Q96HU1 749 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 FAM198AQ9UFP1 575 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 CD2APQ9Y5K6 639 aa18.18■□□□□ 0.5
CIRBP-212ENST00000587169 POLRMTO00411 1230 aaKnown RBP18.17■□□□□ 0.5
CIRBP-212ENST00000587169 CREB1P16220 341 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 GAP43P17677 238 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 HIBCHQ6NVY1 386 aaPredicted RBP18.17■□□□□ 0.5
CIRBP-212ENST00000587169 MKL1Q969V6 931 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 PCDHB18PQ96TA0 734 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 INTS9Q9NV88 658 aaKnown RBP18.17■□□□□ 0.5
CIRBP-212ENST00000587169 NYAP2Q9P242 653 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 FRMPD4Q14CM0 1322 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 A0A1W2PRG0 241 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 PPP1R7Q15435 360 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 CCDC137Q6PK04 289 aaKnown RBP18.17■□□□□ 0.5
CIRBP-212ENST00000587169 NSMFQ6X4W1 530 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 CNOT10Q9H9A5 744 aaKnown RBP18.17■□□□□ 0.5
CIRBP-212ENST00000587169 EMSYQ7Z589 1322 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 CCT8L1PA6NM43 557 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 GH2P01242 217 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 CIITAP33076 1130 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 PPP3CAQ08209 521 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 BFSP1Q12934 665 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 RRP1BQ14684 758 aaKnown RBP18.17■□□□□ 0.5
CIRBP-212ENST00000587169 CCDC174Q6PII3 467 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 C3orf20Q8ND61 904 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 LMO3Q8TAP4 145 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 TBC1D31Q96DN5 1066 aa18.17■□□□□ 0.5
CIRBP-212ENST00000587169 HGSO14964 777 aaPredicted RBP18.16■□□□□ 0.5
CIRBP-212ENST00000587169 SGPL1O95470 568 aa18.16■□□□□ 0.5
CIRBP-212ENST00000587169 NUDT17P0C025 328 aa18.16■□□□□ 0.5
CIRBP-212ENST00000587169 MMP13P45452 471 aa18.16■□□□□ 0.5
CIRBP-212ENST00000587169 DDX23Q9BUQ8 820 aaKnown RBP18.16■□□□□ 0.5
CIRBP-212ENST00000587169 FAM187AA6NFU0 413 aa18.16■□□□□ 0.5
CIRBP-212ENST00000587169 EIF3DO15371 548 aaKnown RBP eCLIP18.16■□□□□ 0.5
CIRBP-212ENST00000587169 SLC26A4O43511 780 aa18.16■□□□□ 0.5
CIRBP-212ENST00000587169 PHF2O75151 1096 aa18.16■□□□□ 0.5
CIRBP-212ENST00000587169 CALCAP01258 141 aa18.16■□□□□ 0.5
CIRBP-212ENST00000587169 CCDC105Q8IYK2 499 aa18.16■□□□□ 0.5
CIRBP-212ENST00000587169 NAP1L3Q99457 506 aaPredicted RBP18.16■□□□□ 0.5
CIRBP-212ENST00000587169 DMAC2Q9NW81 257 aa18.16■□□□□ 0.5
CIRBP-212ENST00000587169 CCDC169A6NNP5 214 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 FOSP01100 380 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-212ENST00000587169 ARP10275 920 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 TCP11Q8WWU5 503 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 ZSWIM1Q9BR11 485 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 BAIAP2L1Q9UHR4 511 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 PRR12Q9ULL5 1215 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 TRPC6Q9Y210 931 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 PPIP5K2O43314 1243 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 GAS7O60861 476 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 BMP3P12645 472 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 HOXA10P31260 410 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-212ENST00000587169 ECE1P42892 770 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 SNX1Q13596 522 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 LONRF1Q17RB8 773 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 ABCB5Q2M3G0 1257 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 LACTB2Q53H82 288 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-212ENST00000587169 CBWD1Q9BRT8 395 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 ABCF3Q9NUQ8 709 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.15■□□□□ 0.5
CIRBP-212ENST00000587169 HIP1RO75146 1068 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 PSMD10O75832 226 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 ACSL3O95573 720 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 CCDC172P0C7W6 258 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 DHX34Q14147 1143 aaKnown RBP18.15■□□□□ 0.5
CIRBP-212ENST00000587169 KIF22Q14807 665 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 KRT27Q7Z3Y8 459 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 PHLDB2Q86SQ0 1253 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 TBC1D1Q86TI0 1168 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-212ENST00000587169 TAX1BP1Q86VP1 789 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 CDAN1Q8IWY9 1227 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 KIRREL3Q8IZU9 778 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 PGM2Q96G03 612 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 PI4KBQ9UBF8 816 aa18.15■□□□□ 0.5
CIRBP-212ENST00000587169 CLRN2A0PK11 232 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms