RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 CD2BP2O95400 341 aaKnown RBP21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 GLP2RO95838 553 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 U2AF2P26368 475 aaKnown RBP eCLIP21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 CCT6AP40227 531 aaKnown RBP21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 SMAD4Q13485 552 aaKnown RBP21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 DUSP6Q16828 381 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 LLGL2Q6P1M3 1020 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 NOTUMQ6P988 496 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 AGMOQ6ZNB7 445 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 NRDE2Q9H7Z3 1164 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 RSAD1Q9HA92 442 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 NGRNQ9NPE2 291 aaKnown RBP21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 PCDHB6Q9Y5E3 794 aa21.14■□□□□ 0.97
CLPTM1-206ENST00000586975 POMCP01189 267 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 ITGA4P13612 1032 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 RPA1P27694 616 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 TOB1P50616 345 aaPredicted RBP21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 MBTD1Q05BQ5 628 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 PTGDRQ13258 359 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 HAUS3Q68CZ6 603 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 MRPL10Q7Z7H8 261 aaKnown RBP21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 C4orf32Q8N8J7 132 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 RSPH1Q8WYR4 309 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 MSLNLQ96KJ4 702 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 FAM193BQ96PV7 902 aaPredicted RBP21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 CDCA3Q99618 268 aaPredicted RBP21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 APOL6Q9BWW8 343 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 EIF2AQ9BY44 585 aaKnown RBP21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 TRIM6Q9C030 488 aaPredicted RBP21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 LRWD1Q9UFC0 647 aa21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 DBR1Q9UK59 544 aaKnown RBP21.13■□□□□ 0.97
CLPTM1-206ENST00000586975 H3BQV1 296 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 GJB2P29033 226 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 AXLP30530 894 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 AFF1P51825 1210 aaKnown RBP21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 ZP2Q05996 745 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 POU5F1BQ06416 359 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 SMC1AQ14683 1233 aaKnown RBP21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 PCBP1Q15365 356 aaKnown RBP eCLIP21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 SMAD2Q15796 467 aaKnown RBP21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 PADI6Q6TGC4 694 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 TMEM173Q86WV6 379 aaPredicted RBP21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 CDR2LQ86X02 465 aaPredicted RBP21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 ZNF280BQ86YH2 543 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 VPS52Q8N1B4 723 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 TMEM87AQ8NBN3 555 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 MCPH1Q8NEM0 835 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 VN1R2Q8NFZ6 395 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 C1QTNF1Q9BXJ1 281 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 DNAJB4Q9UDY4 337 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 PRKAG3Q9UGI9 489 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 IPPQ9Y573 584 aa21.12■□□□□ 0.97
CLPTM1-206ENST00000586975 ARID2Q68CP9 1835 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 B4GALT5O43286 388 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 CXCL14O95715 111 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 GALTP07902 379 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 NCLP19338 710 aaKnown RBP21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 SLC11A1P49279 550 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 FXR2P51116 673 aaKnown RBP eCLIP21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 BMS1Q14692 1282 aaKnown RBP21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 IFNLR1Q8IU57 520 aaPredicted RBP21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 ADHFE1Q8IWW8 467 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 SMG8Q8ND04 991 aaKnown RBP21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 CNNM3Q8NE01 707 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 APOL5Q9BWW9 433 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 CSRNP2Q9H175 543 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 RNF39Q9H2S5 420 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 POLD4Q9HCU8 107 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 HES2Q9Y543 173 aa21.11■□□□□ 0.97
CLPTM1-206ENST00000586975 CNTNAP2Q9UHC6 1331 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 SRGAP2BP0DMP2 458 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 ARF4P18085 180 aaPredicted RBP21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 LIG1P18858 919 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 ECM1Q16610 540 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 TMEM132AQ24JP5 1023 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 ZBTB8OSQ8IWT0 167 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 MRPL43Q8N983 215 aaKnown RBP21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 SNX29Q8TEQ0 813 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 CCDC51Q96ER9 411 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 IGSF21Q96ID5 467 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 TBC1D32Q96NH3 1257 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 RAB34Q9BZG1 259 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 UBN1Q9NPG3 1134 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 KANSL3Q9P2N6 904 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 KIAA1024Q9UPX6 916 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 SMC3Q9UQE7 1217 aa21.1■□□□□ 0.97
CLPTM1-206ENST00000586975 FSD2A1L4K1 749 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 B4GALT3O60512 393 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 DDHD2O94830 711 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 NPTXRO95502 500 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 EYA4O95677 639 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 CYP11B2P19099 503 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 MCM2P49736 904 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 COASYQ13057 564 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 AMHR2Q16671 573 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 SMRP1Q8NCR6 262 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 BCL7CQ8WUZ0 217 aaPredicted RBP21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 AUTS2Q8WXX7 1259 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 GAD1Q99259 594 aa21.09■□□□□ 0.97
CLPTM1-206ENST00000586975 NFKBIZQ9BYH8 718 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms