RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TM4SF1P30408 202 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 IRX6P78412 446 aaPredicted RBP5.87□□□□□ -1.47
ZNF540-204ENST00000586792 HSP90AB4PQ58FF6 505 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 HSP90AB3PQ58FF7 597 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 Q6ZSN1 163 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 NLRP10Q86W26 655 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 C2CD5Q86YS7 1000 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 TRIM48Q8IWZ4 208 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 NPLOC4Q8TAT6 608 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 KLHL6Q8WZ60 621 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 APBA2Q99767 749 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 KATNBL1Q9H079 304 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 SMOC1Q9H4F8 434 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 AURKAIP1Q9NWT8 199 aaPredicted RBP5.87□□□□□ -1.47
ZNF540-204ENST00000586792 MAP3K15Q6ZN16 1313 aa5.87□□□□□ -1.47
ZNF540-204ENST00000586792 BRCA1P38398 1863 aaKnown RBP5.86□□□□□ -1.47
ZNF540-204ENST00000586792 ARFGEF1Q9Y6D6 1849 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 ANKRD36CQ5JPF3 1778 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 ATP10DQ9P241 1426 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 A0A1W2PQH9 124 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 ERVV-1B6SEH8 477 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 CHL1O00533 1208 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 TPD52L2O43399 206 aaKnown RBP5.86□□□□□ -1.47
ZNF540-204ENST00000586792 DGKIO75912 1065 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 KNG1P01042 644 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 ACRV1P26436 265 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 CHRNA5P30532 468 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 AIMP1Q12904 312 aaKnown RBP5.86□□□□□ -1.47
ZNF540-204ENST00000586792 KCNAB2Q13303 367 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 USP10Q14694 798 aaKnown RBP5.86□□□□□ -1.47
ZNF540-204ENST00000586792 CCDC184Q52MB2 194 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 NAALADL2Q58DX5 795 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 GTF2IRD2BQ6EKJ0 949 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 PRR5LQ6MZQ0 368 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 GPR155Q7Z3F1 870 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 GTF2IRD2Q86UP8 949 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 ZNF513Q8N8E2 541 aaPredicted RBP5.86□□□□□ -1.47
ZNF540-204ENST00000586792 DTX3Q8N9I9 347 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 OR6P1Q8NGX9 317 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 IL17DQ8TAD2 202 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 ZNF483Q8TF39 744 aaPredicted RBP5.86□□□□□ -1.47
ZNF540-204ENST00000586792 GIPC2Q8TF65 315 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 LARP4BQ92615 738 aaKnown RBP5.86□□□□□ -1.47
ZNF540-204ENST00000586792 ZNF622Q969S3 477 aaKnown RBP eCLIP5.86□□□□□ -1.47
ZNF540-204ENST00000586792 BRIP1Q9BX63 1249 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 STK31Q9BXU1 1019 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 NKX2-4Q9H2Z4 354 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 MMRN2Q9H8L6 949 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 MYOTQ9UBF9 498 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 DBF4Q9UBU7 674 aaPredicted RBP5.86□□□□□ -1.47
ZNF540-204ENST00000586792 DMRT1Q9Y5R6 373 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 SLC30A1Q9Y6M5 507 aa5.86□□□□□ -1.47
ZNF540-204ENST00000586792 CACNA1SQ13698 1873 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 IBTKQ9P2D0 1353 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-204ENST00000586792 RAMP2O60895 175 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 DDX58O95786 925 aaKnown RBP5.85□□□□□ -1.47
ZNF540-204ENST00000586792 CR2P20023 1033 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 GPTP24298 496 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 LSAMPQ13449 338 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 SOGA3Q5TF21 947 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 CCDC181Q5TID7 509 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 LRCH2Q5VUJ6 765 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 CCDC30Q5VVM6 783 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 MAMDC4Q6UXC1 1216 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 PPP1R42Q7Z4L9 355 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 RPGRQ92834 1020 aaKnown RBP5.85□□□□□ -1.47
ZNF540-204ENST00000586792 CHAMP1Q96JM3 812 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 AGAP2Q99490 1192 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 TMX4Q9H1E5 349 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-204ENST00000586792 EPB41L1Q9H4G0 881 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 METTL14Q9HCE5 456 aaKnown RBP5.85□□□□□ -1.47
ZNF540-204ENST00000586792 DDX21Q9NR30 783 aaKnown RBP eCLIP5.85□□□□□ -1.47
ZNF540-204ENST00000586792 HYPKQ9NX55 129 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 CHPF2Q9P2E5 772 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 TMA7Q9Y2S6 64 aaKnown RBP5.85□□□□□ -1.47
ZNF540-204ENST00000586792 NUP98P52948 1817 aa5.85□□□□□ -1.47
ZNF540-204ENST00000586792 COL11A2P13942 1736 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-204ENST00000586792 ANKRD31Q8N7Z5 1873 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 IL16Q14005 1332 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 RNF123Q5XPI4 1314 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 ELL2O00472 640 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-204ENST00000586792 MEFVO15553 781 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-204ENST00000586792 ANXA1P04083 346 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 DNAJA1P31689 397 aaKnown RBP5.84□□□□□ -1.47
ZNF540-204ENST00000586792 ZNF143P52747 638 aaPredicted RBP5.84□□□□□ -1.47
ZNF540-204ENST00000586792 EIF6P56537 245 aaKnown RBP5.84□□□□□ -1.47
ZNF540-204ENST00000586792 MRPL58Q14197 206 aaKnown RBP5.84□□□□□ -1.47
ZNF540-204ENST00000586792 CSRP2Q16527 193 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 KRT24Q2M2I5 525 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 PARP10Q53GL7 1025 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 CYP4F22Q6NT55 531 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 KIAA1211LQ6NV74 962 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 COPS6Q7L5N1 327 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 NOP9Q86U38 636 aaKnown RBP5.84□□□□□ -1.47
ZNF540-204ENST00000586792 TRIM59Q8IWR1 403 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 TTLL11Q8NHH1 800 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.84□□□□□ -1.47
ZNF540-204ENST00000586792 MASTLQ96GX5 879 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 APEX2Q9UBZ4 518 aa5.84□□□□□ -1.47
ZNF540-204ENST00000586792 ARFGEF2Q9Y6D5 1785 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms