RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CBWD3Q5JTY5 395 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 CBWD5Q5RIA9 395 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 TMCO3Q6UWJ1 677 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 CYFIP1Q7L576 1253 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 EMSYQ7Z589 1322 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 SAPCD2Q86UD0 394 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 AFAP1L1Q8TED9 768 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 SEPT1Q8WYJ6 367 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 OPTNQ96CV9 577 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 FAM81BQ96LP2 452 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 CBWD1Q9BRT8 395 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 POLR3FQ9H1D9 316 aaPredicted RBP12.24□□□□□ -0.45
LIG3-204ENST00000585740 IKZF4Q9H2S9 585 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 PCIF1Q9H4Z3 704 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 RNF14Q9UBS8 474 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 PUF60Q9UHX1 559 aaKnown RBP12.24□□□□□ -0.45
LIG3-204ENST00000585740 DNAJC12Q9UKB3 198 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 HYOU1Q9Y4L1 999 aa12.24□□□□□ -0.45
LIG3-204ENST00000585740 A0A087X0T9 212 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 F8VZ95 297 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 GAS2O43903 313 aaKnown RBP12.23□□□□□ -0.45
LIG3-204ENST00000585740 FARP2O94887 1054 aaPredicted RBP12.23□□□□□ -0.45
LIG3-204ENST00000585740 MOCS3O95396 460 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 FAM228BP0C875 321 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 UBA1P22314 1058 aaKnown RBP12.23□□□□□ -0.45
LIG3-204ENST00000585740 MCM3P25205 808 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 CNGA1P29973 690 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 NAMPTP43490 491 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 MXI1P50539 228 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 NAP1L1P55209 391 aaKnown RBP12.23□□□□□ -0.45
LIG3-204ENST00000585740 SOX10P56693 466 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 SP2Q02086 613 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 APBA1Q02410 837 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 SP4Q02446 784 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 PTK2Q05397 1052 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 KCTD2Q14681 263 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 EMC2Q15006 297 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 MTERF2Q49AM1 385 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 EPC2Q52LR7 807 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 LDLRAD1Q5T700 205 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 METTL7BQ6UX53 244 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 ZNF571Q7Z3V5 609 aaPredicted RBP12.23□□□□□ -0.45
LIG3-204ENST00000585740 RDH13Q8NBN7 331 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 MSANTD4Q8NCY6 345 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 CLMNQ96JQ2 1002 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 CALR3Q96L12 384 aaKnown RBP12.23□□□□□ -0.45
LIG3-204ENST00000585740 FBXL18Q96ME1 805 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 MMP19Q99542 508 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 SH2D3AQ9BRG2 576 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 MLXIPQ9HAP2 919 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 XPNPEP1Q9NQW7 623 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 ARHGAP28Q9P2N2 729 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 ADAMTS1Q9UHI8 967 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 SNX12Q9UMY4 172 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 TFR2Q9UP52 801 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 SLC45A1Q9Y2W3 748 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 CASP8AP2Q9UKL3 1982 aa12.23□□□□□ -0.45
LIG3-204ENST00000585740 A0A0A6YYK5 440 aaPredicted RBP12.22□□□□□ -0.45
LIG3-204ENST00000585740 GSTTP1A0A1W2PQM5 241 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 CCDC151A5D8V7 595 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 ENC1O14682 589 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 ERLIN1O75477 346 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 H2AFZP0C0S5 128 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 CLCN6P51797 869 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 CCNA1P78396 465 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 ITIH3Q06033 890 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 STRN3Q13033 797 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 MOGSQ13724 837 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 DRAP1Q14919 205 aaPredicted RBP12.22□□□□□ -0.45
LIG3-204ENST00000585740 SNRNP35Q16560 246 aaKnown RBP12.22□□□□□ -0.45
LIG3-204ENST00000585740 KIAA0753Q2KHM9 967 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 SLFN12LQ6IEE8 588 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 CCDC70Q6NSX1 233 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 ALKBH5Q6P6C2 394 aaKnown RBP12.22□□□□□ -0.45
LIG3-204ENST00000585740 DLK2Q6UY11 383 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 H2AFVQ71UI9 128 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 GPD1LQ8N335 351 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 CAGE1Q8TC20 777 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 MORC4Q8TE76 937 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 LMBR1Q8WVP7 490 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 SLC7A3Q8WY07 619 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 BSNDQ8WZ55 320 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 BICD1Q96G01 975 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 MFSD14AQ96MC6 490 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 JPH2Q9BR39 696 aaPredicted RBP12.22□□□□□ -0.45
LIG3-204ENST00000585740 PORCNQ9H237 461 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 DHX33Q9H6R0 707 aaKnown RBP12.22□□□□□ -0.45
LIG3-204ENST00000585740 AZI2Q9H6S1 392 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 TMEM8AQ9HCN3 771 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 OGFRQ9NZT2 677 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
LIG3-204ENST00000585740 NAGPAQ9UK23 515 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 RAB21Q9UL25 225 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 NENFQ9UMX5 172 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 CAPN6Q9Y6Q1 641 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 DUSP10Q9Y6W6 482 aa12.22□□□□□ -0.45
LIG3-204ENST00000585740 DNAJC25-GNG10A0A024R161 153 aa12.21□□□□□ -0.45
LIG3-204ENST00000585740 ASB14A6NK59 587 aa12.21□□□□□ -0.45
LIG3-204ENST00000585740 EVI5O60447 810 aa12.21□□□□□ -0.45
LIG3-204ENST00000585740 GGPS1O95749 300 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms