RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 PDCD2LQ9BRP1 358 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 NOL10Q9BSC4 688 aaKnown RBP4.3□□□□□ -1.72
VAPA-208ENST00000584796 OXSMQ9NWU1 459 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 NCDNQ9UBB6 729 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 CDK11AQ9UQ88 783 aaPredicted RBP4.3□□□□□ -1.72
VAPA-208ENST00000584796 ERCC6L2Q5T890 1561 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 CLASP1Q7Z460 1538 aa4.3□□□□□ -1.72
VAPA-208ENST00000584796 GRID2IPA4D2P6 1211 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 PPP1R12AO14974 1030 aaPredicted RBP4.29□□□□□ -1.72
VAPA-208ENST00000584796 TRIM24O15164 1050 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 HOXA3O43365 443 aaPredicted RBP4.29□□□□□ -1.72
VAPA-208ENST00000584796 RHOBTB3O94955 611 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 BMP5P22003 454 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 FBLP22087 321 aaKnown RBP4.29□□□□□ -1.72
VAPA-208ENST00000584796 ZFP36P26651 326 aaKnown RBP4.29□□□□□ -1.72
VAPA-208ENST00000584796 NFE2L2Q16236 605 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 FAM214AQ32MH5 1076 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 LY6G5CQ5SRR4 150 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 CXorf67Q86X51 503 aaPredicted RBP4.29□□□□□ -1.72
VAPA-208ENST00000584796 VRK3Q8IV63 474 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 PIK3C3Q8NEB9 887 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 PROKR1Q8TCW9 393 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 HIST1H2AHQ96KK5 128 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 HIST1H2AJQ99878 128 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 TOMM22Q9NS69 142 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 ING3Q9NXR8 418 aa4.29□□□□□ -1.72
VAPA-208ENST00000584796 ALDH1A2O94788 518 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 APOL3O95236 402 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 ABHD16AO95870 558 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 CFBP00751 764 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 LMNAP02545 664 aaKnown RBP4.28□□□□□ -1.72
VAPA-208ENST00000584796 ATP2A2P16615 1042 aaKnown RBP4.28□□□□□ -1.72
VAPA-208ENST00000584796 HK1P19367 917 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 LRRC32Q14392 662 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 CFAP100Q494V2 611 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 DPY19L2P1Q6NXN4 242 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 KIF18BQ86Y91 864 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 OR52N2Q8NGI0 321 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 GPR150Q8NGU9 434 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 CPT1CQ8TCG5 803 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 CPEB1Q9BZB8 566 aaKnown RBP4.28□□□□□ -1.72
VAPA-208ENST00000584796 KANSL2Q9H9L4 492 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 INTS7Q9NVH2 962 aaKnown RBP4.28□□□□□ -1.72
VAPA-208ENST00000584796 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.28□□□□□ -1.72
VAPA-208ENST00000584796 H2AFY2Q9P0M6 372 aaPredicted RBP4.28□□□□□ -1.72
VAPA-208ENST00000584796 MAGEC2Q9UBF1 373 aaPredicted RBP4.28□□□□□ -1.72
VAPA-208ENST00000584796 PACSIN3Q9UKS6 424 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 SORCS3Q9UPU3 1222 aa4.28□□□□□ -1.72
VAPA-208ENST00000584796 MYPNQ86TC9 1320 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 CFTRP13569 1480 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 ELL2O00472 640 aaPredicted RBP4.27□□□□□ -1.73
VAPA-208ENST00000584796 RECQL4O94761 1208 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 SEC24DO94855 1032 aaPredicted RBP4.27□□□□□ -1.73
VAPA-208ENST00000584796 F2P00734 622 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 CD40P25942 277 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 WNT3AP56704 352 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 DSG1Q02413 1049 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 CD69Q07108 199 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 PABPC4Q13310 644 aaKnown RBP eCLIP4.27□□□□□ -1.73
VAPA-208ENST00000584796 BMS1Q14692 1282 aaKnown RBP4.27□□□□□ -1.73
VAPA-208ENST00000584796 PTPAQ15257 358 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 PLEKHG4Q58EX7 1191 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 KCNV1Q6PIU1 500 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 PRIMA1Q86XR5 153 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 EFHBQ8N7U6 833 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 GLB1L3Q8NCI6 653 aaPredicted RBP4.27□□□□□ -1.73
VAPA-208ENST00000584796 SH3TC2Q8TF17 1288 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 VOPP1Q96AW1 172 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 DNAJC2Q99543 621 aaKnown RBP4.27□□□□□ -1.73
VAPA-208ENST00000584796 KCNH6Q9H252 994 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 TMEM260Q9NX78 707 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 USP36Q9P275 1121 aaKnown RBP4.27□□□□□ -1.73
VAPA-208ENST00000584796 PCDHB6Q9Y5E3 794 aa4.27□□□□□ -1.73
VAPA-208ENST00000584796 TOPBP1Q92547 1522 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 AQRO60306 1485 aaKnown RBP eCLIP4.26□□□□□ -1.731e-7■■□□□ 12.8
VAPA-208ENST00000584796 FAM83GA6ND36 823 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 AHRRA9YTQ3 701 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 DNAJC6O75061 913 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 SCAF4O95104 1147 aaKnown RBP4.26□□□□□ -1.73
VAPA-208ENST00000584796 PCDH8O95206 1070 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 LY86O95711 162 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 PFKMP08237 780 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 GYPEP15421 78 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 POU3F2P20265 443 aaPredicted RBP4.26□□□□□ -1.73
VAPA-208ENST00000584796 MRPL49Q13405 166 aaKnown RBP4.26□□□□□ -1.73
VAPA-208ENST00000584796 VPS72Q15906 364 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 ZBTB41Q5SVQ8 909 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 IQSEC1Q6DN90 963 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 DOK3Q7L591 496 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 CDYL2Q8N8U2 506 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 MYEOVQ96EZ4 313 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 CPPED1Q9BRF8 314 aaPredicted RBP4.26□□□□□ -1.73
VAPA-208ENST00000584796 FDXACB1Q9BRP7 624 aaPredicted RBP4.26□□□□□ -1.73
VAPA-208ENST00000584796 LSM14BQ9BX40 385 aaKnown RBP4.26□□□□□ -1.73
VAPA-208ENST00000584796 SLC46A2Q9BY10 475 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 PODXL2Q9NZ53 605 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.26□□□□□ -1.73
VAPA-208ENST00000584796 ZKSCAN5Q9Y2L8 839 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 COL4A3Q01955 1670 aa4.26□□□□□ -1.73
VAPA-208ENST00000584796 TGM5O43548 720 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms