RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 MARCH8Q5T0T0 291 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 VPS53Q5VIR6 699 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 PDXDC2PQ6P474 469 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 PRR23CQ6ZRP0 262 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 LURAP1LQ8IV03 231 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 NSUN6Q8TEA1 469 aaKnown RBP7.15□□□□□ -1.26
CTC1-212ENST00000584439 SLC22A17Q8WUG5 538 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 ALKBH8Q96BT7 664 aaKnown RBP7.15□□□□□ -1.26
CTC1-212ENST00000584439 ACSF2Q96CM8 615 aaPredicted RBP7.15□□□□□ -1.26
CTC1-212ENST00000584439 BBC3Q96PG8 261 aaPredicted RBP7.15□□□□□ -1.26
CTC1-212ENST00000584439 RPP25Q9BUL9 199 aaKnown RBP7.15□□□□□ -1.26
CTC1-212ENST00000584439 NEUROD4Q9HD90 331 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 PXMP2Q9NR77 195 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 ARHGEF3Q9NR81 526 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 SEMA4GQ9NTN9 838 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 DACH1Q9UI36 760 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 LZTS1Q9Y250 596 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.15□□□□□ -1.26
CTC1-212ENST00000584439 PCDHGA2Q9Y5H1 932 aa7.15□□□□□ -1.26
CTC1-212ENST00000584439 B4DLN1 442 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 NT5C1B-RDH14C9J2C7 533 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 OPLAHO14841 1288 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 LAMTOR5O43504 91 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 GOLGA8HP0CJ92 632 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 STAG3L1P0CL83 205 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 SRFP11831 508 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 MZF1P28698 734 aaPredicted RBP7.14□□□□□ -1.27
CTC1-212ENST00000584439 CA8P35219 290 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 MRPL12P52815 198 aaKnown RBP7.14□□□□□ -1.27
CTC1-212ENST00000584439 EMP3P54852 163 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 WTAPQ15007 396 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 UTP14CQ5TAP6 766 aaKnown RBP7.14□□□□□ -1.27
CTC1-212ENST00000584439 ARHGEF16Q5VV41 709 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 ALG1LQ6GMV1 187 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 DCLRE1AQ6PJP8 1040 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 KCNT2Q6UVM3 1135 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 OTOP3Q7RTS5 596 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 GPR149Q86SP6 731 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 DCAF4Q8WV16 495 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 SECISBP2LQ93073 1101 aaKnown RBP7.14□□□□□ -1.27
CTC1-212ENST00000584439 MYADMQ96S97 322 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 SRPK1Q96SB4 655 aaKnown RBP7.14□□□□□ -1.27
CTC1-212ENST00000584439 IWS1Q96ST2 819 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 GPR20Q99678 358 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 UBA5Q9GZZ9 404 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 MLXIPQ9HAP2 919 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 NGRNQ9NPE2 291 aaKnown RBP7.14□□□□□ -1.27
CTC1-212ENST00000584439 ZSCAN32Q9NX65 697 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 GGT7Q9UJ14 662 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 FBXO4Q9UKT5 387 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 LRFN2Q9ULH4 789 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 PLXNB3Q9ULL4 1909 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 WASF3Q9UPY6 502 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 SLC27A5Q9Y2P5 690 aa7.14□□□□□ -1.27
CTC1-212ENST00000584439 PCNX2A6NKB5 2137 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 COL4A2P08572 1712 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 WDR19Q8NEZ3 1342 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 A0A0D9SFI3 127 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 GIPC1O14908 333 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 CXCL14O95715 111 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 MYBP10242 640 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 GNAT2P19087 354 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 HOXC13P31276 330 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 NOVP48745 357 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 TDO2P48775 406 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 SARSP49591 514 aaKnown RBP7.13□□□□□ -1.27
CTC1-212ENST00000584439 PDE1AP54750 535 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 STARD6P59095 220 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 MRPS6P82932 125 aaKnown RBP7.13□□□□□ -1.27
CTC1-212ENST00000584439 PPARAQ07869 468 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 CBLBQ13191 982 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 HDAC1Q13547 482 aaPredicted RBP7.13□□□□□ -1.27
CTC1-212ENST00000584439 SNW1Q13573 536 aaKnown RBP7.13□□□□□ -1.27
CTC1-212ENST00000584439 SMC1AQ14683 1233 aaKnown RBP7.13□□□□□ -1.27
CTC1-212ENST00000584439 PTPN14Q15678 1187 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 LETM2Q2VYF4 491 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 RNF19BQ6ZMZ0 732 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 CCDC149Q6ZUS6 474 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 HS2ST1Q7LGA3 356 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 ZNF589Q86UQ0 364 aaPredicted RBP7.13□□□□□ -1.27
CTC1-212ENST00000584439 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.13□□□□□ -1.27
CTC1-212ENST00000584439 GATA6Q92908 595 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 FAM227BQ96M60 508 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 TMEM47Q9BQJ4 181 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 KRTAP3-3Q9BYR6 98 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 FAM49AQ9H0Q0 323 aaPredicted RBP7.13□□□□□ -1.27
CTC1-212ENST00000584439 IGSF9Q9P2J2 1179 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 GMEB2Q9UKD1 530 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 PRKAB1Q9Y478 270 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 PCDHB7Q9Y5E2 793 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 AK5Q9Y6K8 562 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 ASCC3Q8N3C0 2202 aaKnown RBP7.13□□□□□ -1.27
CTC1-212ENST00000584439 ADAMTS9Q9P2N4 1935 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 CFAP46Q8IYW2 2715 aa7.13□□□□□ -1.27
CTC1-212ENST00000584439 ASXL3Q9C0F0 2248 aa7.12□□□□□ -1.27
CTC1-212ENST00000584439 NRCAMQ92823 1304 aa7.12□□□□□ -1.27
CTC1-212ENST00000584439 HECTD1Q9ULT8 2610 aa7.12□□□□□ -1.27
CTC1-212ENST00000584439 MYO18BQ8IUG5 2567 aa7.12□□□□□ -1.27
CTC1-212ENST00000584439 TSPY2A6NKD2 308 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms