RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ENPP3O14638 875 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 ADAMTS3O15072 1205 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 EIF5BO60841 1220 aaKnown RBP12.55□□□□□ -0.4
CCDC47-206ENST00000584112 CDKL5O76039 1030 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 KLRC1P26715 233 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 CD52P31358 61 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 ITIH3Q06033 890 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 PAK2Q13177 524 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 STK3Q13188 491 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 ODR4Q5SWX8 454 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 PSAPL1Q6NUJ1 521 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 PJA1Q8NG27 643 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 LENG9Q96B70 501 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 ZBTB10Q96DT7 871 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 BORCS6Q96GS4 357 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 FAM167AQ96KS9 214 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 USTQ9Y2C2 406 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 MAFBQ9Y5Q3 323 aaPredicted RBP12.55□□□□□ -0.4
CCDC47-206ENST00000584112 CELSR3Q9NYQ7 3312 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 GAS7O60861 476 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 SFNP31947 248 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 ANAPC15P60006 121 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 TMEM62Q0P6H9 643 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 ANKRD1Q15327 319 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 KIAA1841Q6NSI8 718 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 PHLDB3Q6NSJ2 640 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 CMTR2Q8IYT2 770 aaKnown RBP12.54□□□□□ -0.4
CCDC47-206ENST00000584112 BLIDQ8IZY5 108 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 DAGLBQ8NCG7 672 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 GPR152Q8TDT2 470 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 TBCKQ8TEA7 893 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 RIT2Q99578 217 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 TEKT3Q9BXF9 490 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 AGO3Q9H9G7 860 aaKnown RBP12.54□□□□□ -0.4
CCDC47-206ENST00000584112 GABBR1Q9UBS5 961 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 PADI3Q9ULW8 664 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 GPSM3Q9Y4H4 160 aa12.54□□□□□ -0.4
CCDC47-206ENST00000584112 ZBTB42B2RXF5 422 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 GIPC1O14908 333 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 MSH4O15457 936 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 MAGEB2O15479 319 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 RETP07949 1114 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 STAG3L1P0CL83 205 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 XBP1P17861 261 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 ATP4AP20648 1035 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 JAK3P52333 1124 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 CSRP2Q16527 193 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 Q4G0T1 1027 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 LRCH2Q5VUJ6 765 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 MOXD1Q6UVY6 613 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 NPAS4Q8IUM7 802 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 NELL1Q92832 810 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 CASP10Q92851 521 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 SLC5A5Q92911 643 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
CCDC47-206ENST00000584112 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
CCDC47-206ENST00000584112 DISC1Q9NRI5 854 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 RXFP3Q9NSD7 469 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 HCSTQ9UBK5 93 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 HCFC2Q9Y5Z7 792 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 STK36Q9NRP7 1315 aa12.53□□□□□ -0.4
CCDC47-206ENST00000584112 CYP3A7-CYP3A51PA0A087WV96 503 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 RPS6KA5O75582 802 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 FGF18O76093 207 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 C22orf31O95567 290 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 PLA2G2AP14555 144 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 CYP3A7P24462 503 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 LAIR1Q6GTX8 287 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 KRT25Q7Z3Z0 450 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 KIAA0319LQ8IZA0 1049 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 ZNF710Q8N1W2 664 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 METTL13Q8N6R0 699 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 GLIS3Q8NEA6 775 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 RDM1Q8NG50 284 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 LINC01599Q8WXQ3 324 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 MAP7D2Q96T17 732 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 SCNM1Q9BWG6 230 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 ARHGEF3Q9NR81 526 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 NRBP2Q9NSY0 501 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 RAB23Q9ULC3 237 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 GINS2Q9Y248 185 aa12.52□□□□□ -0.41
CCDC47-206ENST00000584112 C2orf16Q68DN1 1984 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 M0R2N6 131 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 GPR182O15218 404 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 CHMP2AO43633 222 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 EDIL3O43854 480 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 PFKFB2O60825 505 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 LRP3O75074 770 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 OATP04181 439 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 TMOD1P28289 359 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 CRYBB1P53674 252 aaPredicted RBP12.51□□□□□ -0.41
CCDC47-206ENST00000584112 UBE3AQ05086 875 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 SCRN1Q12765 414 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 NFX1Q12986 1120 aaKnown RBP12.51□□□□□ -0.41
CCDC47-206ENST00000584112 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCDC47-206ENST00000584112 ATAT1Q5SQI0 421 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 TRMT1LQ7Z2T5 733 aaKnown RBP12.51□□□□□ -0.41
CCDC47-206ENST00000584112 WASF1Q92558 559 aa12.51□□□□□ -0.41
CCDC47-206ENST00000584112 ACSF2Q96CM8 615 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms