RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TPRNQ4KMQ1 711 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 NOMO2Q5JPE7 1267 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 GLB1LQ6UWU2 654 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 PIK3AP1Q6ZUJ8 805 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 KRT25Q7Z3Z0 450 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 KREMEN2Q8NCW0 462 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 TMEM143Q96AN5 459 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 IGSF21Q96ID5 467 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 TRAIPQ9BWF2 469 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 ADAM7Q9H2U9 754 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 MINDY3Q9H8M7 445 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 KCNMB3Q9NPA1 279 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 CYP26B1Q9NR63 512 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 KIF3AQ9Y496 699 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 COL4A3BPQ9Y5P4 624 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 VPS13AQ96RL7 3174 aa17.49■□□□□ 0.39
SKA2-209ENST00000583976 PLXNA3P51805 1871 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 CCDC194A0A1B0GVG4 234 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 OFD1O75665 1012 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 BRD1O95696 1058 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 CXCL14O95715 111 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 GALTP07902 379 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 DNM2P50570 870 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 PTPN5P54829 565 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 PPP2R5CQ13362 524 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 SAFBQ15424 915 aaKnown RBP eCLIP17.48■□□□□ 0.39
SKA2-209ENST00000583976 EARS2Q5JPH6 523 aaKnown RBP17.48■□□□□ 0.39
SKA2-209ENST00000583976 AGMOQ6ZNB7 445 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 ZNF280BQ86YH2 543 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 FBXO18Q8NFZ0 1043 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 LXNQ9BS40 222 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 CHST12Q9NRB3 414 aa17.48■□□□□ 0.39
SKA2-209ENST00000583976 SSBP05455 408 aaKnown RBP eCLIP17.47■□□□□ 0.39
SKA2-209ENST00000583976 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
SKA2-209ENST00000583976 CTSAP10619 480 aa17.47■□□□□ 0.39
SKA2-209ENST00000583976 QARSP47897 775 aaKnown RBP17.47■□□□□ 0.39
SKA2-209ENST00000583976 POLGP54098 1239 aaPredicted RBP17.47■□□□□ 0.39
SKA2-209ENST00000583976 RNASELQ05823 741 aaKnown RBP17.47■□□□□ 0.39
SKA2-209ENST00000583976 PTPN14Q15678 1187 aa17.47■□□□□ 0.39
SKA2-209ENST00000583976 UBXN11Q5T124 520 aa17.47■□□□□ 0.39
SKA2-209ENST00000583976 LARP1BQ659C4 914 aaKnown RBP17.47■□□□□ 0.39
SKA2-209ENST00000583976 CES5AQ6NT32 575 aa17.47■□□□□ 0.39
SKA2-209ENST00000583976 NEK8Q86SG6 692 aa17.47■□□□□ 0.39
SKA2-209ENST00000583976 HAS1Q92839 578 aa17.47■□□□□ 0.39
SKA2-209ENST00000583976 PCDHB2Q9Y5E7 798 aa17.47■□□□□ 0.39
SKA2-209ENST00000583976 H3BQV1 296 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 DDHD2O94830 711 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 RAB27AP51159 221 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 CYP4A11Q02928 519 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 GNL2Q13823 731 aaKnown RBP17.46■□□□□ 0.39
SKA2-209ENST00000583976 EMC2Q15006 297 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 NCAPH2Q6IBW4 605 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 KIAA1841Q6NSI8 718 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 TMC5Q6UXY8 1006 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 DDX53Q86TM3 631 aaKnown RBP17.46■□□□□ 0.39
SKA2-209ENST00000583976 TDRD5Q8NAT2 981 aaKnown RBP17.46■□□□□ 0.39
SKA2-209ENST00000583976 SLC22A17Q8WUG5 538 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 SLC7A3Q8WY07 619 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 INTS4Q96HW7 963 aaKnown RBP17.46■□□□□ 0.39
SKA2-209ENST00000583976 CEP170P1Q96L14 293 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 NECTIN4Q96NY8 510 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 DHX33Q9H6R0 707 aaKnown RBP17.46■□□□□ 0.39
SKA2-209ENST00000583976 RGL1Q9NZL6 768 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 NR2E1Q9Y466 385 aa17.46■□□□□ 0.39
SKA2-209ENST00000583976 MYO10Q9HD67 2058 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 ZBTB39O15060 712 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 POMCP01189 267 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 SRGAP2CP0DJJ0 459 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 ITIH3Q06033 890 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 SPIRE1Q08AE8 756 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 MTMR3Q13615 1198 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 PRPF31Q8WWY3 499 aaKnown RBP17.45■□□□□ 0.38
SKA2-209ENST00000583976 PSPC1Q8WXF1 523 aaKnown RBP17.45■□□□□ 0.38
SKA2-209ENST00000583976 TNFRSF25Q93038 417 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 DZANK1Q9NVP4 752 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 MARCH5Q9NX47 278 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 SORCS3Q9UPU3 1222 aa17.45■□□□□ 0.38
SKA2-209ENST00000583976 F8W810 466 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 CCNT1O60563 726 aaKnown RBP17.44■□□□□ 0.38
SKA2-209ENST00000583976 ZNF623O75123 536 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 SKIP12755 728 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 AVPR2P30518 371 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 HOXA11P31270 313 aaPredicted RBP17.44■□□□□ 0.38
SKA2-209ENST00000583976 YWHABP31946 246 aaKnown RBP17.44■□□□□ 0.38
SKA2-209ENST00000583976 MTHFRP42898 656 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 LAMTOR4Q0VGL1 99 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 CTTNQ14247 550 aaKnown RBP17.44■□□□□ 0.38
SKA2-209ENST00000583976 URGCPQ8TCY9 931 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 DYDC2Q96IM9 177 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 RIPOR3Q96MK2 946 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 INO80BQ9C086 356 aaPredicted RBP17.44■□□□□ 0.38
SKA2-209ENST00000583976 RSAD1Q9HA92 442 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 XPNPEP1Q9NQW7 623 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 DBR1Q9UK59 544 aaKnown RBP17.44■□□□□ 0.38
SKA2-209ENST00000583976 PRG3Q9Y2Y8 225 aaPredicted RBP17.44■□□□□ 0.38
SKA2-209ENST00000583976 IRAK3Q9Y616 596 aa17.44■□□□□ 0.38
SKA2-209ENST00000583976 WNT7AO00755 349 aa17.43■□□□□ 0.38
SKA2-209ENST00000583976 P4HBP07237 508 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms