RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 GPR101Q96P66 508 aaPredicted RBP5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 GPR87Q9BY21 358 aa5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 SLC29A3Q9BZD2 475 aa5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 PCIF1Q9H4Z3 704 aa5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 SLC39A2Q9NP94 309 aa5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 EMC7Q9NPA0 242 aa5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 ACSS2Q9NR19 701 aa5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 OXSMQ9NWU1 459 aa5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 THG1LQ9NWX6 298 aaKnown RBP5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 FRMD4BQ9Y2L6 1034 aa5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 ATP23Q9Y6H3 246 aa5.06□□□□□ -1.6
SMCHD1-209ENST00000583441 XDHP47989 1333 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 PMS2P1A4D2B8 440 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 MAN2B1O00754 1011 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 NKRFO15226 690 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 AMY2AP04746 511 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 COL6A2P12110 1019 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 AMY2BP19961 511 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 EPHA5P54756 1037 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 FAM50AQ14320 339 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 RABL3Q5HYI8 236 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 ODR4Q5SWX8 454 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 GPR158Q5T848 1215 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 IQSEC1Q6DN90 963 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 KCTD1Q719H9 257 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 NOSTRINQ8IVI9 506 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 ZZZ3Q8IYH5 903 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 SPATA3Q8NHX4 192 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 CHTF18Q8WVB6 975 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 FBXO10Q9UK96 956 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 SPEF1Q9Y4P9 236 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 INSL6Q9Y581 213 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 SPO11Q9Y5K1 396 aa5.05□□□□□ -1.6
SMCHD1-209ENST00000583441 WASHC2CQ9Y4E1 1318 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 K7ESF4 209 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 C1RP00736 705 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 CYP17A1P05093 508 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 ADCY8P40145 1251 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 MRE11P49959 708 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 PHC1P78364 1004 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 TAP1Q03518 808 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 RIN1Q13671 783 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 CC2D1AQ6P1N0 951 aaPredicted RBP5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 RTKN2Q8IZC4 609 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 KIAA1958Q8N8K9 716 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 PRDM13Q9H4Q3 707 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 KCNH7Q9NS40 1196 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 B3GALT1Q9Y5Z6 326 aa5.04□□□□□ -1.6
SMCHD1-209ENST00000583441 A0A1W2PRX2 142 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 TCRBV5S4A2TA0A5A2 114 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 KRT37O76014 449 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 ZBTB48P10074 688 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 LSP1P33241 339 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 FNTBP49356 437 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 KIF11P52732 1056 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 EPHB1P54762 984 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 EVA1CP58658 441 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 HGFACQ04756 655 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 DDB1Q16531 1140 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 CREB3L3Q68CJ9 461 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 LRRC55Q6ZSA7 311 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 NME9Q86XW9 330 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 Q8N9P0 234 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 SH3RF2Q8TEC5 729 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 DLG3Q92796 817 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 SLC5A5Q92911 643 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 MTMR8Q96EF0 704 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 SPATA5L1Q9BVQ7 753 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 PCGF6Q9BYE7 350 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 SPTLC3Q9NUV7 552 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 KLHL42Q9P2K6 505 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 CDC42EP3Q9UKI2 254 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 FAM184BQ9ULE4 1060 aa5.03□□□□□ -1.6
SMCHD1-209ENST00000583441 SCDO00767 359 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 KATNA1O75449 491 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 PTPN1P18031 435 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 CD40P25942 277 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 SDHAP31040 664 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 ID4P47928 161 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 HERVK_113P62684 666 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 ITKQ08881 620 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 MTMR1Q13613 665 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 EIF4HQ15056 248 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 SYDE2Q5VT97 1194 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 LHFPL2Q6ZUX7 228 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 CNTD1Q8N815 330 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 SUPT20HQ8NEM7 779 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 JDP2Q8WYK2 163 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 ASPSCR1Q9BZE9 553 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 CD244Q9BZW8 370 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 TOMM22Q9NS69 142 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 USP36Q9P275 1121 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 TRPS1Q9UHF7 1281 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 TCEAL9Q9UHQ7 104 aa5.02□□□□□ -1.61
SMCHD1-209ENST00000583441 WASHC2AQ641Q2 1341 aa5.01□□□□□ -1.61
SMCHD1-209ENST00000583441 E2F8A0AVK6 867 aa5.01□□□□□ -1.61
SMCHD1-209ENST00000583441 ALDH1L1O75891 902 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms