RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 K7ERI5 159 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 GADD45BO75293 160 aaPredicted RBP23.85■■□□□ 1.41
TSEN54-208ENST00000583173 FAM13AO94988 1023 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 ZNF202O95125 648 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 KRT18P05783 430 aaKnown RBP23.85■■□□□ 1.41
TSEN54-208ENST00000583173 MAPTP10636 758 aaKnown RBP23.85■■□□□ 1.41
TSEN54-208ENST00000583173 PBX2P40425 430 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 AMPD3Q01432 767 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 MAPK6Q16659 721 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 MRPL10Q7Z7H8 261 aaKnown RBP23.85■■□□□ 1.41
TSEN54-208ENST00000583173 ECHDC2Q86YB7 292 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 FMR1NBQ8N0W7 255 aaPredicted RBP23.85■■□□□ 1.41
TSEN54-208ENST00000583173 ZNF689Q96CS4 500 aaPredicted RBP23.85■■□□□ 1.41
TSEN54-208ENST00000583173 RAD9AQ99638 391 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 ST6GALNAC4Q9H4F1 302 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 RC3H2Q9HBD1 1191 aaKnown RBP23.85■■□□□ 1.41
TSEN54-208ENST00000583173 DACT1Q9NYF0 836 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 PIN4Q9Y237 131 aaKnown RBP23.85■■□□□ 1.41
TSEN54-208ENST00000583173 USP20Q9Y2K6 914 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 YBX2Q9Y2T7 364 aaKnown RBP23.85■■□□□ 1.41
TSEN54-208ENST00000583173 PCDHA11Q9Y5I1 949 aa23.85■■□□□ 1.41
TSEN54-208ENST00000583173 PTPRSQ13332 1948 aa23.84■■□□□ 1.41
TSEN54-208ENST00000583173 TRAK2O60296 914 aa23.84■■□□□ 1.41
TSEN54-208ENST00000583173 PRKCBP05771 671 aa23.84■■□□□ 1.41
TSEN54-208ENST00000583173 ATF7P17544 494 aaPredicted RBP23.84■■□□□ 1.41
TSEN54-208ENST00000583173 SMTNP53814 917 aa23.84■■□□□ 1.41
TSEN54-208ENST00000583173 CSPP1Q1MSJ5 1256 aa23.84■■□□□ 1.41
TSEN54-208ENST00000583173 ZNF720Q7Z2F6 126 aa23.84■■□□□ 1.41
TSEN54-208ENST00000583173 NPAS4Q8IUM7 802 aa23.84■■□□□ 1.41
TSEN54-208ENST00000583173 CPB2Q96IY4 423 aa23.84■■□□□ 1.41
TSEN54-208ENST00000583173 RNF19AQ9NV58 838 aa23.84■■□□□ 1.41
TSEN54-208ENST00000583173 DGKIO75912 1065 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 ERLIN2O94905 339 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 EOMESO95936 686 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 MYOGP15173 224 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 GAP43P17677 238 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 CASP1P29466 404 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 GTF2BQ00403 316 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 KRBA2Q6ZNG9 492 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 HAUS6Q7Z4H7 955 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 GRAMD1CQ8IYS0 662 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 CEP57L1Q8IYX8 460 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 CCDC51Q96ER9 411 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 PTPRHQ9HD43 1115 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 TMEM161AQ9NX61 479 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 SEL1LQ9UBV2 794 aa23.83■■□□□ 1.41
TSEN54-208ENST00000583173 CNTNAP2Q9UHC6 1331 aa23.83■■□□□ 1.4
TSEN54-208ENST00000583173 TBCAO75347 108 aaKnown RBP23.82■■□□□ 1.4
TSEN54-208ENST00000583173 PPP1R37O75864 691 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 UPP2O95045 317 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 SCP2P22307 547 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 AFMP43652 599 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 FXR1P51114 621 aaKnown RBP eCLIP23.82■■□□□ 1.4
TSEN54-208ENST00000583173 EHHADHQ08426 723 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 CUL4BQ13620 913 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 TPRNQ4KMQ1 711 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 NOTUMQ6P988 496 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 SFR1Q86XK3 245 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 SP7Q8TDD2 431 aaPredicted RBP23.82■■□□□ 1.4
TSEN54-208ENST00000583173 LRCH3Q96II8 777 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 ACO2Q99798 780 aaKnown RBP23.82■■□□□ 1.4
TSEN54-208ENST00000583173 FAM105AQ9NUU6 356 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 PANK4Q9NVE7 773 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 PCDHB7Q9Y5E2 793 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 PHLPP2Q6ZVD8 1323 aa23.82■■□□□ 1.4
TSEN54-208ENST00000583173 GOLGA6L4A6NEF3 574 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 KLRC4O43908 158 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 STAG3L1P0CL83 205 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 NMT1P30419 496 aaKnown RBP23.81■■□□□ 1.4
TSEN54-208ENST00000583173 NCBP1Q09161 790 aaKnown RBP23.81■■□□□ 1.4
TSEN54-208ENST00000583173 PRPF4BQ13523 1007 aaKnown RBP23.81■■□□□ 1.4
TSEN54-208ENST00000583173 RAB30Q15771 203 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 TWF2Q6IBS0 349 aaKnown RBP23.81■■□□□ 1.4
TSEN54-208ENST00000583173 FAM117BQ6P1L5 589 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 SMG8Q8ND04 991 aaKnown RBP23.81■■□□□ 1.4
TSEN54-208ENST00000583173 EIF2AQ9BY44 585 aaKnown RBP23.81■■□□□ 1.4
TSEN54-208ENST00000583173 ZHX3Q9H4I2 956 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 PDZD7Q9H5P4 517 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 OLFML3Q9NRN5 406 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 INSL6Q9Y581 213 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 PCDHB2Q9Y5E7 798 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 CHD9Q3L8U1 2897 aa23.81■■□□□ 1.4
TSEN54-208ENST00000583173 PVALEFA0A1B0GWK0 134 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 H0YCG3 227 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 ABLIM1O14639 778 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 TLL1O43897 1013 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 ARHGEF15O94989 841 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 SKIP12755 728 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 LIG1P18858 919 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 HERC4Q5GLZ8 1057 aaPredicted RBP23.8■■□□□ 1.4
TSEN54-208ENST00000583173 EEF1DP3Q658K8 133 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 GPR153Q6NV75 609 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 FAM178BQ8IXR5 827 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 CCDC65Q8IXS2 484 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 SLC17A8Q8NDX2 589 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 BLZF1Q9H2G9 400 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 RNF216Q9NWF9 866 aaPredicted RBP23.8■■□□□ 1.4
TSEN54-208ENST00000583173 TBX20Q9UMR3 447 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 TNFSF13BQ9Y275 285 aa23.8■■□□□ 1.4
TSEN54-208ENST00000583173 LCHNA4D1U4 455 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms