RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 MRPL4Q9BYD3 311 aaKnown RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 AGPAT5Q9NUQ2 364 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 KIAA1257Q9ULG3 409 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 PCDHB4Q9Y5E5 795 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 SPDYE2BA6NHP3 402 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 CLIC2O15247 247 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 VIL1P09327 827 aaKnown RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 SPDYE6P0CI01 402 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 YWHABP31946 246 aaKnown RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 COPS2P61201 443 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 ASPHQ12797 758 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 MESDQ14696 234 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 SPDYE2Q495Y8 402 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 ZNF572Q7Z3I7 529 aaPredicted RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 ATL2Q8NHH9 583 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 ZNF564Q8TBZ8 553 aaPredicted RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 MTMR8Q96EF0 704 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 TRERF1Q96PN7 1200 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 RANBP17Q9H2T7 1088 aaKnown RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 CYP26B1Q9NR63 512 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 TXLNGQ9NUQ3 528 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 HSPBP1Q9NZL4 362 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 SLC9A2Q9UBY0 812 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 CNOT8Q9UFF9 292 aaKnown RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 MAGEB2O15479 319 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 LSM8O95777 96 aaKnown RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 ZFXP17010 805 aaPredicted RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 PHKA2P46019 1235 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 GUCY2FP51841 1108 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 LRRC55Q6ZSA7 311 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 CCDC25Q86WR0 208 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 SCFD1Q8WVM8 642 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 CDKL2Q92772 493 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 SNF8Q96H20 258 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 AVENQ9NQS1 362 aaPredicted RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 AGPAT3Q9NRZ7 376 aa6.27□□□□□ -1.41
RTTN-209ENST00000583043 SIPA1L3O60292 1781 aaPredicted RBP6.27□□□□□ -1.41
RTTN-209ENST00000583043 PSTPIP1O43586 416 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 CYTH3O43739 400 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 SLC37A4O43826 429 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 CD19P15391 556 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 BMP6P22004 513 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 NOVP48745 357 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 DRG2P55039 364 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 HERVK_113P62684 666 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 KIAA1755Q5JYT7 1200 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 ZNF720Q7Z2F6 126 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 DNERQ8NFT8 737 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 MSTO1Q9BUK6 570 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 GCOM2Q9BZD3 368 aaPredicted RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 ZNF302Q9NR11 478 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 PARVAQ9NVD7 372 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.26□□□□□ -1.41
RTTN-209ENST00000583043 SMG5Q9UPR3 1016 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 KDM4FA0A1W2PPD8 638 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 LRRIQ4A6NIV6 560 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 MEIS1O00470 390 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 EXTL3O43909 919 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 LUC7L3O95232 432 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 GGCXP38435 758 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 HSPA9P38646 679 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 STAT3P40763 770 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 GTF2A1P52655 376 aaPredicted RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 PMS2P54278 862 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 GCNT1Q02742 428 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 DACT2Q5SW24 774 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 DPY19L2Q6NUT2 758 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 KIAA0895Q8NCT3 520 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 PSPC1Q8WXF1 523 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 FAXDC2Q96IV6 333 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 INTS13Q9NVM9 706 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 NFU1Q9UMS0 254 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 PLAAQ9Y263 795 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 FAM169AQ9Y6X4 670 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 LRP5O75197 1615 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 EIF3HO15372 352 aaKnown RBP eCLIP6.26□□□□□ -1.41
RTTN-209ENST00000583043 CIB2O75838 187 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 PPP1R37O75864 691 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 GALCP54803 685 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 TSNAXIP1Q2TAA8 658 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 TTBK2Q6IQ55 1244 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 APOBEC3HQ6NTF7 200 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 FASTKD5Q7L8L6 764 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 COL23A1Q86Y22 540 aaPredicted RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 MTMR14Q8NCE2 650 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 TPCN2Q8NHX9 752 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 SGSM3Q96HU1 749 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 RNPC3Q96LT9 517 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 PPP1R2P1Q96PQ5 205 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 PURBQ96QR8 312 aaKnown RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 VCX3BQ9H321 246 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 JPH1Q9HDC5 661 aaPredicted RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 UBN1Q9NPG3 1134 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 ZNF277Q9NRM2 450 aaPredicted RBP6.26□□□□□ -1.41
RTTN-209ENST00000583043 ASNSD1Q9NWL6 643 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 PKD2L1Q9P0L9 805 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 CASZ1Q86V15 1759 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 GMNCA6NCL1 334 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 KLRK1P26718 216 aa6.26□□□□□ -1.41
RTTN-209ENST00000583043 GARSP41250 739 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms