RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 CKAP2LQ8IYA6 745 aa10.47□□□□□ -0.73
GGA3-212ENST00000582376 FAM160A2Q8N612 972 aaPredicted RBP10.47□□□□□ -0.73
GGA3-212ENST00000582376 URGCPQ8TCY9 931 aa10.47□□□□□ -0.73
GGA3-212ENST00000582376 GATA6Q92908 595 aa10.47□□□□□ -0.73
GGA3-212ENST00000582376 ZNF668Q96K58 619 aaPredicted RBP10.47□□□□□ -0.73
GGA3-212ENST00000582376 FAM193BQ96PV7 902 aaPredicted RBP10.47□□□□□ -0.73
GGA3-212ENST00000582376 KXD1Q9BQD3 176 aa10.47□□□□□ -0.73
GGA3-212ENST00000582376 MXRA8Q9BRK3 442 aa10.47□□□□□ -0.73
GGA3-212ENST00000582376 TMEM175Q9BSA9 504 aa10.47□□□□□ -0.73
GGA3-212ENST00000582376 CHST12Q9NRB3 414 aa10.47□□□□□ -0.73
GGA3-212ENST00000582376 HEBP1Q9NRV9 189 aa10.47□□□□□ -0.73
GGA3-212ENST00000582376 RXFP3Q9NSD7 469 aa10.47□□□□□ -0.73
GGA3-212ENST00000582376 NDRG2Q9UN36 371 aaKnown RBP10.47□□□□□ -0.73
GGA3-212ENST00000582376 SPDYE3A6NKU9 549 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 MEIS3P2A8K0S8 358 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 MAN2B1O00754 1011 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 TGM5O43548 720 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 DDHD2O94830 711 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 ZNF806P0C7X5 589 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 CXCL12P48061 93 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 GLUD2P49448 558 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 NOVA1P51513 510 aaKnown RBP10.46□□□□□ -0.73
GGA3-212ENST00000582376 ZNF252P-AS1Q0IIN9 211 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 ITGB3BPQ13352 177 aaPredicted RBP10.46□□□□□ -0.73
GGA3-212ENST00000582376 SOWAHCQ53LP3 525 aaPredicted RBP10.46□□□□□ -0.73
GGA3-212ENST00000582376 TWF2Q6IBS0 349 aaKnown RBP10.46□□□□□ -0.73
GGA3-212ENST00000582376 EFCAB12Q6NXP0 572 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 TAS1R1Q7RTX1 841 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 GRASPQ7Z6J2 395 aaPredicted RBP10.46□□□□□ -0.73
GGA3-212ENST00000582376 LONP2Q86WA8 852 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 FGF13Q92913 245 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 TRAIPQ9BWF2 469 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 ARRDC1-AS1Q9H2J1 176 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 CNNM2Q9H8M5 875 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 PSTPIP2Q9H939 334 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 CEP131Q9UPN4 1083 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 WASF3Q9UPY6 502 aa10.46□□□□□ -0.73
GGA3-212ENST00000582376 FLNBO75369 2602 aaKnown RBP10.46□□□□□ -0.74
GGA3-212ENST00000582376 GREB1Q4ZG55 1949 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 SHISA7A6NL88 538 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 DDX39AO00148 427 aaKnown RBP10.45□□□□□ -0.74
GGA3-212ENST00000582376 NRP1O14786 923 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 AXIN1O15169 862 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 ZMYND10O75800 440 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 CCNE2O96020 404 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 ATP4AP20648 1035 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 KIF5BP33176 963 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 RAB27AP51159 221 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 GPC3P51654 580 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 NTHL1P78549 312 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 SATB1Q01826 763 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 DSG1Q02413 1049 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 SWSAP1Q6NVH7 229 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 MIS18BP1Q6P0N0 1132 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 TRMT1LQ7Z2T5 733 aaKnown RBP10.45□□□□□ -0.74
GGA3-212ENST00000582376 TICAM2Q86XR7 235 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 LRRC71Q8N4P6 559 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 LINC01465Q8N7H1 131 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 NLRP7Q8WX94 980 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 PGBD4Q96DM1 585 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 RRP36Q96EU6 259 aaKnown RBP10.45□□□□□ -0.74
GGA3-212ENST00000582376 AGO4Q9HCK5 861 aaKnown RBP10.45□□□□□ -0.74
GGA3-212ENST00000582376 FAM105AQ9NUU6 356 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 ANKFY1Q9P2R3 1169 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 PCDHA6Q9UN73 950 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 PCDHA8Q9Y5H6 950 aa10.45□□□□□ -0.74
GGA3-212ENST00000582376 FRYQ5TBA9 3013 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 ASPMQ8IZT6 3477 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 ZNF623O75123 536 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 CCDC6Q16204 474 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 UBE2SQ16763 222 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 IMMTQ16891 758 aaKnown RBP10.44□□□□□ -0.74
GGA3-212ENST00000582376 RNF43Q68DV7 783 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 LILRA6Q6PI73 481 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 GLYCTKQ8IVS8 523 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 ZNF687Q8N1G0 1237 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 DNASE1L2Q92874 299 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 LOXL4Q96JB6 756 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 SCNM1Q9BWG6 230 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 LMAN1LQ9HAT1 526 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.44□□□□□ -0.74
GGA3-212ENST00000582376 MARCH5Q9NX47 278 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 KANSL3Q9P2N6 904 aa10.44□□□□□ -0.74
GGA3-212ENST00000582376 SEC63Q9UGP8 760 aaKnown RBP10.44□□□□□ -0.74
GGA3-212ENST00000582376 PRG3Q9Y2Y8 225 aaPredicted RBP10.44□□□□□ -0.74
GGA3-212ENST00000582376 MTCL1Q9Y4B5 1905 aaKnown RBP10.44□□□□□ -0.74
GGA3-212ENST00000582376 GIPC1O14908 333 aa10.43□□□□□ -0.74
GGA3-212ENST00000582376 ECI2O75521 394 aa10.43□□□□□ -0.74
GGA3-212ENST00000582376 CSDE1O75534 798 aaKnown RBP10.43□□□□□ -0.74
GGA3-212ENST00000582376 TOP3BO95985 862 aaKnown RBP10.43□□□□□ -0.74
GGA3-212ENST00000582376 HNRNPA1P09651 372 aaKnown RBP eCLIP10.43□□□□□ -0.74
GGA3-212ENST00000582376 HEATR6Q6AI08 1181 aaKnown RBP10.43□□□□□ -0.74
GGA3-212ENST00000582376 CYB5R4Q7L1T6 521 aa10.43□□□□□ -0.74
GGA3-212ENST00000582376 RNF168Q8IYW5 571 aaPredicted RBP10.43□□□□□ -0.74
GGA3-212ENST00000582376 ITFG1Q8TB96 612 aa10.43□□□□□ -0.74
GGA3-212ENST00000582376 GCOM2Q9BZD3 368 aaPredicted RBP10.43□□□□□ -0.74
GGA3-212ENST00000582376 LY9Q9HBG7 655 aa10.43□□□□□ -0.74
GGA3-212ENST00000582376 FNIP2Q9P278 1114 aa10.43□□□□□ -0.74
GGA3-212ENST00000582376 PIN4Q9Y237 131 aaKnown RBP10.43□□□□□ -0.74
GGA3-212ENST00000582376 SPEGQ15772 3267 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms