RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 STK17AQ9UEE5 414 aa13.96□□□□□ -0.17
SNORD55-201ENST00000581525 ODF2LQ9ULJ1 636 aa13.96□□□□□ -0.17
SNORD55-201ENST00000581525 PCDHB2Q9Y5E7 798 aa13.96□□□□□ -0.17
SNORD55-201ENST00000581525 MRPL42Q9Y6G3 142 aaKnown RBP13.96□□□□□ -0.17
SNORD55-201ENST00000581525 SPTBN5Q9NRC6 3674 aaKnown RBP13.96□□□□□ -0.18
SNORD55-201ENST00000581525 ZMYM2Q9UBW7 1377 aa13.96□□□□□ -0.18
SNORD55-201ENST00000581525 PHLPP2Q6ZVD8 1323 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 LRRIQ4A6NIV6 560 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 OFD1O75665 1012 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 ERLIN2O94905 339 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 FGFR1P11362 822 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 SCP2P22307 547 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 CEBPZQ03701 1054 aaKnown RBP13.95□□□□□ -0.18
SNORD55-201ENST00000581525 SPECC1Q5M775 1068 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 TAS1R3Q7RTX0 852 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 ZBTB8OSQ8IWT0 167 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 SPRYD3Q8NCJ5 442 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 MAFAQ8NHW3 353 aaPredicted RBP13.95□□□□□ -0.18
SNORD55-201ENST00000581525 LARP4BQ92615 738 aaKnown RBP13.95□□□□□ -0.18
SNORD55-201ENST00000581525 PGBD4Q96DM1 585 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 POLD4Q9HCU8 107 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 UBN1Q9NPG3 1134 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 CFAP45Q9UL16 551 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 XIRP2A4UGR9 3374 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 MYO9BQ13459 2157 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 UNC80Q8N2C7 3258 aa13.95□□□□□ -0.18
SNORD55-201ENST00000581525 CNTNAP2Q9UHC6 1331 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 CARNS1A5YM72 827 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 B4GALT5O43286 388 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 CUTAO60888 179 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 EDN1P05305 212 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 PLS3P13797 630 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 GIT2Q14161 759 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 STK38Q15208 465 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 MAPK6Q16659 721 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 CSPP1Q1MSJ5 1256 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 FNDC1Q4ZHG4 1894 aaPredicted RBP13.94□□□□□ -0.18
SNORD55-201ENST00000581525 NT5DC1Q5TFE4 455 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 SLC27A1Q6PCB7 646 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 KCNG4Q8TDN1 519 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 MRPL38Q96DV4 380 aaKnown RBP13.94□□□□□ -0.18
SNORD55-201ENST00000581525 FIZ1Q96SL8 496 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 PLIN2Q99541 437 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 C11orf84Q9BUA3 381 aaPredicted RBP13.94□□□□□ -0.18
SNORD55-201ENST00000581525 PTPRHQ9HD43 1115 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 CCDC39Q9UFE4 941 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 PLAGL2Q9UPG8 496 aa13.94□□□□□ -0.18
SNORD55-201ENST00000581525 A0A087X0B3 334 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 MEIS3P2A8K0S8 358 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 K7ERI5 159 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 PRKCBP05771 671 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 NCKAP1LP55160 1127 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 PEX3P56589 373 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 PLCB3Q01970 1234 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 GPM6BQ13491 265 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 CAMK1Q14012 370 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 MCM6Q14566 821 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 ZRSR1Q15695 479 aaKnown RBP13.93□□□□□ -0.18
SNORD55-201ENST00000581525 TMEM161BQ8NDZ6 487 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 DEPTORQ8TB45 409 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 SPPL3Q8TCT6 385 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 CPB2Q96IY4 423 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 EIF2AQ9BY44 585 aaKnown RBP13.93□□□□□ -0.18
SNORD55-201ENST00000581525 MRPL9Q9BYD2 267 aaKnown RBP13.93□□□□□ -0.18
SNORD55-201ENST00000581525 LARSQ9P2J5 1176 aaKnown RBP13.93□□□□□ -0.18
SNORD55-201ENST00000581525 KANSL3Q9P2N6 904 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 GIT1Q9Y2X7 761 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 IPPQ9Y573 584 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 RALGAPA2Q2PPJ7 1873 aa13.93□□□□□ -0.18
SNORD55-201ENST00000581525 SFI1A8K8P3 1242 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 N4BP3O15049 544 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 GTPBP6O43824 516 aaPredicted RBP13.92□□□□□ -0.18
SNORD55-201ENST00000581525 ITGB1P05556 798 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 LAG3P18627 525 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 PROZP22891 400 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 CTNNB1P35222 781 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 UBE3AQ05086 875 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 DNM1Q05193 864 aaKnown RBP13.92□□□□□ -0.18
SNORD55-201ENST00000581525 DMP1Q13316 513 aaPredicted RBP13.92□□□□□ -0.18
SNORD55-201ENST00000581525 PRPF4BQ13523 1007 aaKnown RBP13.92□□□□□ -0.18
SNORD55-201ENST00000581525 COL19A1Q14993 1142 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 E2F4Q16254 413 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 PAN2Q504Q3 1202 aaKnown RBP13.92□□□□□ -0.18
SNORD55-201ENST00000581525 NOMO2Q5JPE7 1267 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 RRAGBQ5VZM2 374 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 SHC4Q6S5L8 630 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 CCDC73Q6ZRK6 1079 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 GPBP1Q86WP2 473 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 LRRC43Q8N309 656 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 KLHL23Q8NBE8 558 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 COLGALT1Q8NBJ5 622 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 HELQQ8TDG4 1101 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 GDPD5Q8WTR4 605 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 LPPQ93052 612 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 DNAJC19Q96DA6 116 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 ACO2Q99798 780 aaKnown RBP13.92□□□□□ -0.18
SNORD55-201ENST00000581525 REEP2Q9BRK0 252 aa13.92□□□□□ -0.18
SNORD55-201ENST00000581525 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms