RNA–Protein interactions for RNA: ENST00000581010.1

SENP3-205, Transcript of SUMO specific peptidase 3, humanhuman

Gene SENP3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-205ENST00000581010 EPM2AIP1Q7L775 607 aaPredicted RBP8.17□□□□□ -1.1
SENP3-205ENST00000581010 FILIP1Q7Z7B0 1213 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 RNF180Q86T96 592 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 KSR1Q8IVT5 923 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 DAW1Q8N136 415 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 LRRC71Q8N4P6 559 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 PCSK9Q8NBP7 692 aaKnown RBP8.17□□□□□ -1.1
SENP3-205ENST00000581010 TRAPPC12Q8WVT3 735 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 PPM1EQ8WY54 764 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 VTI1AQ96AJ9 217 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 EEF2KMTQ96G04 330 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 NECAB3Q96P71 396 aaPredicted RBP8.17□□□□□ -1.1
SENP3-205ENST00000581010 C16orf70Q9BSU1 422 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 MTG1Q9BT17 334 aaPredicted RBP8.17□□□□□ -1.1
SENP3-205ENST00000581010 KIFC3Q9BVG8 833 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 NOC4LQ9BVI4 516 aaKnown RBP8.17□□□□□ -1.1
SENP3-205ENST00000581010 FGFBP2Q9BYJ0 223 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 C2orf40Q9H1Z8 148 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 VPS16Q9H269 839 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 RNPEPQ9H4A4 650 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 HMX1Q9NP08 348 aaPredicted RBP8.17□□□□□ -1.1
SENP3-205ENST00000581010 XPNPEP1Q9NQW7 623 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 TBX20Q9UMR3 447 aa8.17□□□□□ -1.1
SENP3-205ENST00000581010 DNAH12Q6ZR08 3092 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 C17orf102A2RUQ5 167 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 M0QZ92 97 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 CLIC2O15247 247 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 SLC16A3O15427 465 aaKnown RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 ADCY6O43306 1168 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 PGK1P00558 417 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 F2P00734 622 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 SMIM10L2AP0DMW4 78 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 SMIM10L2BP0DMW5 78 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 SIP14410 1827 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 ZNF18P17022 549 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 GLRA2P23416 452 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 CCND3P30281 292 aaPredicted RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 ARL2P36404 184 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 CLCN3P51790 818 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 COPB1P53618 953 aaKnown RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 GJA9P57773 515 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 SNRPFP62306 86 aaKnown RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 GTF2BQ00403 316 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 UBXN1Q04323 297 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 LAMTOR4Q0VGL1 99 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 SHHQ15465 462 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 TARBP2Q15633 366 aaKnown RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 MAPK6Q16659 721 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 DCAF17Q5H9S7 520 aaPredicted RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 C9orf50Q5SZB4 431 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 NFRKBQ6P4R8 1299 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 MTHFD1LQ6UB35 978 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 TMC6Q7Z403 805 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 USP37Q86T82 979 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 PPFIBP1Q86W92 1011 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 RNF149Q8NC42 400 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 TRPV1Q8NER1 839 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 ASAP3Q8TDY4 903 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 PRPF31Q8WWY3 499 aaKnown RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 NLRP7Q8WX94 980 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 BSNDQ8WZ55 320 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 POMGNT1Q8WZA1 660 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 NRCAMQ92823 1304 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 PPP1R9BQ96SB3 815 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 DUSP9Q99956 384 aaKnown RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 LBHD1Q9BQE6 289 aaPredicted RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 TUBGCP2Q9BSJ2 902 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 LRFN3Q9BTN0 628 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 C1QTNF1Q9BXJ1 281 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 FAM49AQ9H0Q0 323 aaPredicted RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 KCTD10Q9H3F6 313 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 ST6GALNAC4Q9H4F1 302 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 METTL14Q9HCE5 456 aaKnown RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 AGPAT3Q9NRZ7 376 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 SETD4Q9NVD3 440 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 ARMCX3Q9UH62 379 aaPredicted RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 LIMA1Q9UHB6 759 aaKnown RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 DDX20Q9UHI6 824 aaKnown RBP8.16□□□□□ -1.1
SENP3-205ENST00000581010 TRAF3IP3Q9Y228 551 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 NOD1Q9Y239 953 aa8.16□□□□□ -1.1
SENP3-205ENST00000581010 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.16□□□□□ -1.1
SENP3-205ENST00000581010 ZMYM2Q9UBW7 1377 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 INO80B-WBP1J3KQ70 363 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 ERLIN2O94905 339 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 CLSTN1O94985 981 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 C22orf31O95567 290 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 CYP2C9P11712 490 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 HOXD8P13378 290 aaPredicted RBP8.15□□□□□ -1.1
SENP3-205ENST00000581010 PSMC2P35998 433 aaKnown RBP8.15□□□□□ -1.1
SENP3-205ENST00000581010 GSDMDP57764 484 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 PURAQ00577 322 aaKnown RBP8.15□□□□□ -1.1
SENP3-205ENST00000581010 CDC42EP1Q00587 391 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 PPP2R3AQ06190 1150 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 NCBP1Q09161 790 aaKnown RBP8.15□□□□□ -1.1
SENP3-205ENST00000581010 CAPSQ13938 189 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 MAN2A1Q16706 1144 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 SLFN12LQ6IEE8 588 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 APBB1IPQ7Z5R6 666 aaPredicted RBP8.15□□□□□ -1.1
SENP3-205ENST00000581010 RSPH3Q86UC2 560 aa8.15□□□□□ -1.1
SENP3-205ENST00000581010 MAP4K3Q8IVH8 894 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms