RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 RFXAPO00287 272 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 ACKR2O00590 384 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 CUTAO60888 179 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 FGFR1P11362 822 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 PLCG1P19174 1290 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 NCLP19338 710 aaKnown RBP18.12■□□□□ 0.49
IFT20-210ENST00000580357 CTNNB1P35222 781 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 GPM6BQ13491 265 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 KARSQ15046 597 aaKnown RBP18.12■□□□□ 0.49
IFT20-210ENST00000580357 AMHR2Q16671 573 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 PAN2Q504Q3 1202 aaKnown RBP18.12■□□□□ 0.49
IFT20-210ENST00000580357 RRAGBQ5VZM2 374 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 CCDC73Q6ZRK6 1079 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 APBB1IPQ7Z5R6 666 aaPredicted RBP18.12■□□□□ 0.49
IFT20-210ENST00000580357 RAD54LQ92698 747 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 CLIC6Q96NY7 704 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 RUSC1Q9BVN2 902 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 LMAN2LQ9H0V9 348 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 TMEM134Q9H6X4 195 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 TYW1Q9NV66 732 aaKnown RBP18.12■□□□□ 0.49
IFT20-210ENST00000580357 KANSL3Q9P2N6 904 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 MTCH2Q9Y6C9 303 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 CNTNAP2Q9UHC6 1331 aa18.12■□□□□ 0.49
IFT20-210ENST00000580357 MYO9BQ13459 2157 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 EPOPA6NHQ4 379 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 CCDC169A6NNP5 214 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 BRD1O95696 1058 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 PLS3P13797 630 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 ARF4P18085 180 aaPredicted RBP18.11■□□□□ 0.49
IFT20-210ENST00000580357 PEX3P56589 373 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 PRPF4BQ13523 1007 aaKnown RBP18.11■□□□□ 0.49
IFT20-210ENST00000580357 SLC27A1Q6PCB7 646 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 GLB1LQ6UWU2 654 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 SPIRE2Q8WWL2 714 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 BSNDQ8WZ55 320 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 LARP4BQ92615 738 aaKnown RBP18.11■□□□□ 0.49
IFT20-210ENST00000580357 SYMPKQ92797 1274 aaKnown RBP18.11■□□□□ 0.49
IFT20-210ENST00000580357 TRIM6Q9C030 488 aaPredicted RBP18.11■□□□□ 0.49
IFT20-210ENST00000580357 KMT5AQ9NQR1 393 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 BLOC1S4Q9NUP1 217 aa18.11■□□□□ 0.49
IFT20-210ENST00000580357 MRPL42Q9Y6G3 142 aaKnown RBP18.11■□□□□ 0.49
IFT20-210ENST00000580357 N4BP3O15049 544 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 PRKCBP05771 671 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 LINC00271P0C7V0 271 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 ITGA4P13612 1032 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 ATF7P17544 494 aaPredicted RBP18.1■□□□□ 0.49
IFT20-210ENST00000580357 LAG3P18627 525 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 ABCD1P33897 745 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 NPTX2P47972 431 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 MCM6Q14566 821 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 TMEM132AQ24JP5 1023 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 ARSHQ5FYA8 562 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 SPECC1Q5M775 1068 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 UBXN11Q5T124 520 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 SV2BQ7L1I2 683 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 GPBP1Q86WP2 473 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 DAW1Q8N136 415 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 LRRC43Q8N309 656 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 ADPGKQ9BRR6 497 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 RNF19AQ9NV58 838 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 RCOR1Q9UKL0 485 aa18.1■□□□□ 0.49
IFT20-210ENST00000580357 LPXNO60711 386 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 OFD1O75665 1012 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 KRT18P05783 430 aaKnown RBP18.09■□□□□ 0.49
IFT20-210ENST00000580357 GATMP50440 423 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 MAPK7Q13164 816 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 PKP1Q13835 747 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 NOMO2Q5JPE7 1267 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 USP49Q70CQ1 688 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 SPRED2Q7Z698 418 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 URGCPQ8TCY9 931 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 HELQQ8TDG4 1101 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 GDPD5Q8WTR4 605 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 MRPL38Q96DV4 380 aaKnown RBP18.09■□□□□ 0.49
IFT20-210ENST00000580357 CPB2Q96IY4 423 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 LRRC27Q9C0I9 530 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 CCDC113Q9H0I3 377 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 CWH43Q9H720 699 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 POLD4Q9HCU8 107 aa18.09■□□□□ 0.49
IFT20-210ENST00000580357 SFI1A8K8P3 1242 aa18.08■□□□□ 0.48
IFT20-210ENST00000580357 UBE3AQ05086 875 aa18.08■□□□□ 0.48
IFT20-210ENST00000580357 STRN3Q13033 797 aa18.08■□□□□ 0.48
IFT20-210ENST00000580357 DHX8Q14562 1220 aaKnown RBP18.08■□□□□ 0.48
IFT20-210ENST00000580357 CLLU1OSQ5K130 101 aa18.08■□□□□ 0.48
IFT20-210ENST00000580357 CUEDC2Q9H467 287 aa18.08■□□□□ 0.48
IFT20-210ENST00000580357 RSAD1Q9HA92 442 aa18.08■□□□□ 0.48
IFT20-210ENST00000580357 ARHGAP28Q9P2N2 729 aa18.08■□□□□ 0.48
IFT20-210ENST00000580357 PUF60Q9UHX1 559 aaKnown RBP18.08■□□□□ 0.48
IFT20-210ENST00000580357 PLAGL2Q9UPG8 496 aa18.08■□□□□ 0.48
IFT20-210ENST00000580357 GIT1Q9Y2X7 761 aa18.08■□□□□ 0.48
IFT20-210ENST00000580357 IPPQ9Y573 584 aa18.08■□□□□ 0.48
IFT20-210ENST00000580357 B4GALT5O43286 388 aa18.07■□□□□ 0.48
IFT20-210ENST00000580357 FAM13AO94988 1023 aa18.07■□□□□ 0.48
IFT20-210ENST00000580357 PPM1AP35813 382 aa18.07■□□□□ 0.48
IFT20-210ENST00000580357 ME1P48163 572 aa18.07■□□□□ 0.48
IFT20-210ENST00000580357 ALDH7A1P49419 539 aaKnown RBP18.07■□□□□ 0.48
IFT20-210ENST00000580357 KRT85P78386 507 aa18.07■□□□□ 0.48
IFT20-210ENST00000580357 NUCB2P80303 420 aa18.07■□□□□ 0.48
IFT20-210ENST00000580357 KRT17Q04695 432 aa18.07■□□□□ 0.48
IFT20-210ENST00000580357 DNM1Q05193 864 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms