RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 DDX53Q86TM3 631 aaKnown RBP16.62■□□□□ 0.25
MKS1-205ENST00000577315 RNF135Q8IUD6 432 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 VN1R2Q8NFZ6 395 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 SUSD6Q92537 303 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 FAM122AQ96E09 287 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 IGSF21Q96ID5 467 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 NFKBIZQ9BYH8 718 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 FOXP1Q9H334 677 aaPredicted RBP16.62■□□□□ 0.25
MKS1-205ENST00000577315 MINDY3Q9H8M7 445 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 XPNPEP1Q9NQW7 623 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 BMP2KQ9NSY1 1161 aaPredicted RBP16.62■□□□□ 0.25
MKS1-205ENST00000577315 INPP5FQ9Y2H2 1132 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 IRAK3Q9Y616 596 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 C5orf42Q9H799 3197 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 C2orf71A6NGG8 1288 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 LOC730098B7Z3J9 87 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 NT5C1B-RDH14C9J2C7 533 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 ZBTB39O15060 712 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 CXCL14O95715 111 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 GALTP07902 379 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 HOXA11P31270 313 aaPredicted RBP16.61■□□□□ 0.25
MKS1-205ENST00000577315 ST3GAL1Q11201 340 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 NOTUMQ6P988 496 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 AGMOQ6ZNB7 445 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 CCDC83Q8IWF9 413 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 VPS52Q8N1B4 723 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 ERMNQ8TAM6 284 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 TMEM175Q9BSA9 504 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 ZBP1Q9H171 429 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 TUFT1Q9NNX1 390 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 RAPGEFL1Q9UHV5 662 aa16.61■□□□□ 0.25
MKS1-205ENST00000577315 INO80B-WBP1J3KQ70 363 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 ALDH2P05091 517 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 CTSAP10619 480 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 ITGA4P13612 1032 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 MCM7P33993 719 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 CA8P35219 290 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 ARL2P36404 184 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 PLA2G5P39877 138 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 ITIH3Q06033 890 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 GNL2Q13823 731 aaKnown RBP16.6■□□□□ 0.25
MKS1-205ENST00000577315 LONRF3Q496Y0 759 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 UBXN11Q5T124 520 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 HACE1Q8IYU2 909 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 FAM184AQ8NB25 1140 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 MCPH1Q8NEM0 835 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 S1PR5Q9H228 398 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 DAXXQ9UER7 740 aaPredicted RBP16.6■□□□□ 0.25
MKS1-205ENST00000577315 HCFC2Q9Y5Z7 792 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 TECTAO75443 2155 aa16.6■□□□□ 0.25
MKS1-205ENST00000577315 POTEMA6NI47 508 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 MEIS3P2A8K0S8 358 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 TSPAN1O60635 241 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 ATP2B1P20020 1258 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 MUTP22033 750 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 TRAPPC10P48553 1259 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 RBM25P49756 843 aaKnown RBP16.59■□□□□ 0.25
MKS1-205ENST00000577315 RBM10P98175 930 aaKnown RBP16.59■□□□□ 0.25
MKS1-205ENST00000577315 CES5AQ6NT32 575 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 LLGL2Q6P1M3 1020 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 SYCE2Q6PIF2 218 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 PPFIBP1Q86W92 1011 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 NECTIN4Q96NY8 510 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 NACC1Q96RE7 527 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 POLR3CQ9BUI4 534 aaPredicted RBP16.59■□□□□ 0.25
MKS1-205ENST00000577315 GBP3Q9H0R5 595 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 CSRNP2Q9H175 543 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 TMEM60Q9H2L4 133 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 DZANK1Q9NVP4 752 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 MUTYHQ9UIF7 546 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 DBR1Q9UK59 544 aaKnown RBP16.59■□□□□ 0.25
MKS1-205ENST00000577315 NOL7Q9UMY1 257 aaKnown RBP16.59■□□□□ 0.25
MKS1-205ENST00000577315 FAN1Q9Y2M0 1017 aa16.59■□□□□ 0.25
MKS1-205ENST00000577315 MTCL1Q9Y4B5 1905 aaKnown RBP16.58■□□□□ 0.25
MKS1-205ENST00000577315 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.58■□□□□ 0.24
MKS1-205ENST00000577315 WNT7AO00755 349 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 CLASP2O75122 1294 aaKnown RBP16.58■□□□□ 0.24
MKS1-205ENST00000577315 OR52Z1P0C646 297 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 SLC11A1P49279 550 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 GUCY1B3Q02153 619 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 CAPSQ13938 189 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 PIGOQ8TEQ8 1089 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 EDAQ92838 391 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 TRIM6Q9C030 488 aaPredicted RBP16.58■□□□□ 0.24
MKS1-205ENST00000577315 KCNH6Q9H252 994 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 SSX2IPQ9Y2D8 614 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 IPPQ9Y573 584 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 STK24Q9Y6E0 443 aa16.58■□□□□ 0.24
MKS1-205ENST00000577315 ZNF318Q5VUA4 2279 aa16.57■□□□□ 0.24
MKS1-205ENST00000577315 ZMYM2Q9UBW7 1377 aa16.57■□□□□ 0.24
MKS1-205ENST00000577315 INPPL1O15357 1258 aa16.57■□□□□ 0.24
MKS1-205ENST00000577315 USO1O60763 962 aaKnown RBP16.57■□□□□ 0.24
MKS1-205ENST00000577315 SPATA31C1P0DKV0 1188 aa16.57■□□□□ 0.24
MKS1-205ENST00000577315 GLRA2P23416 452 aa16.57■□□□□ 0.24
MKS1-205ENST00000577315 RPA1P27694 616 aa16.57■□□□□ 0.24
MKS1-205ENST00000577315 MTHFRP42898 656 aa16.57■□□□□ 0.24
MKS1-205ENST00000577315 MBTD1Q05BQ5 628 aa16.57■□□□□ 0.24
MKS1-205ENST00000577315 TTC38Q5R3I4 469 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms