RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SMIM10L2AP0DMW4 78 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 SMIM10L2BP0DMW5 78 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 THPOP40225 353 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 DGKGP49619 791 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 AFF1P51825 1210 aaKnown RBP7.16□□□□□ -1.26
NUP88-212ENST00000576708 RBL2Q08999 1139 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 SART3Q15020 963 aaKnown RBP7.16□□□□□ -1.26
NUP88-212ENST00000576708 UBE2SQ16763 222 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 CNKSR3Q6P9H4 555 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 NFXL1Q6ZNB6 911 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 SRBD1Q8N5C6 995 aaKnown RBP7.16□□□□□ -1.26
NUP88-212ENST00000576708 GDPD5Q8WTR4 605 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 RNPEPQ9H4A4 650 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 SETD4Q9NVD3 440 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 FRMPD4Q14CM0 1322 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 CNTNAP5Q8WYK1 1306 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 BAZ2BQ9UIF8 2168 aaKnown RBP7.16□□□□□ -1.26
NUP88-212ENST00000576708 REV3LO60673 3130 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 ABHD14A-ACY1A0A1B0GW23 586 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 C17orf102A2RUQ5 167 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 LINC01553A4QN01 128 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 RSPH10B2B2RC85 870 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 MEIS2O14770 477 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 ATP9AO75110 1047 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 SMNDC1O75940 238 aaKnown RBP eCLIP7.15□□□□□ -1.26
NUP88-212ENST00000576708 GJB5O95377 273 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 CTSHP09668 335 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 RSPH10BP0C881 870 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 TGFB3P10600 412 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 ICAM3P32942 547 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 IKBKEQ14164 716 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.15□□□□□ -1.26
NUP88-212ENST00000576708 CREB3L3Q68CJ9 461 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 KCNV1Q6PIU1 500 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 CASC1Q6TDU7 716 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 SERINC5Q86VE9 423 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 SAMD3Q8N6K7 520 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 DBF4BQ8NFT6 615 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 CTCFLQ8NI51 663 aaPredicted RBP7.15□□□□□ -1.26
NUP88-212ENST00000576708 SMARCC2Q8TAQ2 1214 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 ATP6V0A1Q93050 837 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 ZBTB10Q96DT7 871 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 RRP36Q96EU6 259 aaKnown RBP7.15□□□□□ -1.26
NUP88-212ENST00000576708 INPP4AQ96PE3 977 aaPredicted RBP7.15□□□□□ -1.26
NUP88-212ENST00000576708 UHRF1Q96T88 793 aaPredicted RBP7.15□□□□□ -1.26
NUP88-212ENST00000576708 POP1Q99575 1024 aaKnown RBP7.15□□□□□ -1.26
NUP88-212ENST00000576708 GPR20Q99678 358 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 SPZ1Q9BXG8 430 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 FRRS1LQ9P0K9 344 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 RAPGEFL1Q9UHV5 662 aa7.15□□□□□ -1.26
NUP88-212ENST00000576708 DOCK5Q9H7D0 1870 aa7.15□□□□□ -1.27
NUP88-212ENST00000576708 CCDC69A6NI79 296 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 METTL12A8MUP2 240 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 PDE2AO00408 941 aaPredicted RBP7.14□□□□□ -1.27
NUP88-212ENST00000576708 NOP56O00567 594 aaKnown RBP7.14□□□□□ -1.27
NUP88-212ENST00000576708 FIBPO43427 364 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 DDAH1O94760 285 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 ITGB5P18084 799 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 POU3F3P20264 500 aaPredicted RBP7.14□□□□□ -1.27
NUP88-212ENST00000576708 CDC25BP30305 580 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 HOXC8P31273 242 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 MCM5P33992 734 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 COL4A4P53420 1690 aaPredicted RBP7.14□□□□□ -1.27
NUP88-212ENST00000576708 TRAF1Q13077 416 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 NECTIN1Q15223 517 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 GNPTABQ3T906 1256 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 METTL7BQ6UX53 244 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 RUFY4Q6ZNE9 571 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 MYOCDQ8IZQ8 938 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 ASAP3Q8TDY4 903 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 FOXD4L4Q8WXT5 416 aaPredicted RBP7.14□□□□□ -1.27
NUP88-212ENST00000576708 TCEANC2Q96MN5 208 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 MAP3K14Q99558 947 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 RAD9AQ99638 391 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 C17orf80Q9BSJ5 609 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 SUGCTQ9HAC7 445 aa7.14□□□□□ -1.27
NUP88-212ENST00000576708 SH2B1Q9NRF2 756 aaPredicted RBP7.14□□□□□ -1.27
NUP88-212ENST00000576708 MYO9BQ13459 2157 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 TCF20Q9UGU0 1960 aaKnown RBP7.13□□□□□ -1.27
NUP88-212ENST00000576708 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.13□□□□□ -1.27
NUP88-212ENST00000576708 GSTTP1A0A1W2PQM5 241 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 PARNO95453 639 aaKnown RBP7.13□□□□□ -1.27
NUP88-212ENST00000576708 KCNA2P16389 499 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 MARK3P27448 753 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 KIF5BP33176 963 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 TCF7P36402 384 aaPredicted RBP7.13□□□□□ -1.27
NUP88-212ENST00000576708 GSK3AP49840 483 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 ERVK-21P61565 698 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 ADAM17P78536 824 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 NEDD9Q14511 834 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 PLEKHG4Q58EX7 1191 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 PCNX4Q63HM2 1172 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 LINC00114Q6XXX2 140 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 NLRX1Q86UT6 975 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 MICU3Q86XE3 530 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 DMRTC2Q8IXT2 367 aaPredicted RBP7.13□□□□□ -1.27
NUP88-212ENST00000576708 GIPC2Q8TF65 315 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 LMBR1Q8WVP7 490 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 CUL5Q93034 780 aa7.13□□□□□ -1.27
NUP88-212ENST00000576708 NXPE3Q969Y0 559 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms